Curator Dashboard

Ontology of logical observation identifier names and codes (LOINC); Version 2.26; January 2, 2009

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• SciCrunch
• 13 years ago - by Anonymous

Shared research facility dedicated to improving human health by finding next generation of therapeutic agents against wide variety of diseases. The CSC is driving innovation in drug discovery by bringing together experts in drug screening with cell and molecular biologists engaged in disease research. Has assembled diverse collection of compounds derived from marine organisms, setting our facility apart as a leader in the discovery of therapeutic natural products.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Database contains reference brain atlases for many insect species, neuron morphology when available, repository for published anatomical data, etc. Provides insect neuroanatomical and functional data.

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• NIF
• 4 months ago - by Anonymous

Ontology that is a module of the OntoNeuroLOG ontology that covers the field of mental state assessments, i.e. instruments, instrument variables, assessments, and resulting scores, developed in the context of the NeuroLOG project, a french project aiming at integrating distributed heterogeous resources in neuroimaging. It includes a generic domain core ontology, that provides a general model of such entities and a general taxonomy of behavioural, neurosychological and neuroclinical instruments, that can be easily extended to model any particular kind of instrument. It also includes such extensions for 8 relatively standard instruments, namely: (1) the Beck-depression-inventory-(BDI-II), (2) the Expanded-Disability-Status-Scale, (3) the Controlled-oral-word-association-test, (4) the Free-and-Cued-Selective-Reminding-Test-with-Immediate-Recall-16-item-version-(The-Grober-and-Buschke-test), (5) the Mini-Mental-State, (6) the Stroop-color-and-word-test, (7) the Trail-making-test-(TMT), (8) the Wechsler-Adult-Intelligence-Scale-third-edition, (9) the Clinical-Dementia-Rating-scale, (10) the Category-verbal-fluency, (11) the Rey-Osterrieth-Complex-Figure-Test-(CFT).

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• SciCrunch
• 13 years ago - by Anonymous

Open source software tool as collection of image processing algorithms implemented in Python programming language.Image processing library that implements algorithms and utilities developed by active, international team of collaborators.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software R package to provide simple and uniform way of evaluating R expressions asynchronously using various resources available to the user. Unified parallel and distributed processing in R for everyone.

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• RRID
• 3 months ago - by Anonymous

Ontology that describes the medical information necessary for early detection of the oral cancer reoccurrence extracted from the NeoMark Project.

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• SciCrunch
• 13 years ago - by Anonymous

Software package for analyzing one and two photon calcium imaging datasets.Can be used to create GUI-less, command line ready analysis pipelines. Supports Neurodata Without Borders data standard for reading/writing cell-extraction (e.g. outputs of PCA-ICA, CELLMax, CNMF, CNMF-E, EXTRACT, etc.). Supports reading and writing NWB movie files with continued integration planned. Supports most major imaging movie file formats: HDF5, NWB, AVI, ISXD [Inscopix], and TIFF.

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• RRID-Legacy
• 5 years ago - submitted by Anita Bandrowski

Environmentally controlled facility that provides the equipment, advice, and technical support required to enable research involving laboratory rodents. Provides husbandry, care, and animal welfare while supporting preclinical in vivo models. Provides technical, husbandry, and legislative support.

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• RRID
• 3 months ago - submitted by Nadia Cross

Terms associated with pediatrics, representing information related to child health and development from pre-birth through 21 years of age; contributed by the National Institute of Child Health and Human Development.

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• SciCrunch
• 13 years ago - by Anonymous

Provides Penn State research community with modern, centralized facility for housing, breeding and performing experiments with zebrafish.Provides physical and intellectual infrastructure for investigators whose research can benefit from use of zebrafish as model system.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Centralized molecular and analytical core that provides full service genomic library preparation, high-throughput DNA/RNA extractions, small molecule analysis, and routine isolation and storage of microbial strains. Specializes in environmental samples and offer low-cost fees for training and walk-in instrument use. Functions as a bio-repository of experimental arthropod models including Drosophila and other endemic insects.

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• SciCrunch
• 3 months ago - submitted by Edyta Vieth

Ontology consisting of terms that describe protein chemical modifications, logically linked by an is_a relationship in such a way as to form a direct acyclic graph (DAG). The PSI-MOD ontology has more than 45 top-level nodes, and provides alternative hierarchical paths for classifying protein modifications either by the molecular structure of the modification, or by the amino acid residue that is modified.

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• SciCrunch
• 13 years ago - by Anonymous

Open source whole genome association analysis toolset, designed to perform range of basic, large scale analyses in computationally efficient manner. Used for analysis of genotype/phenotype data. Through integration with gPLINK and Haploview, there is some support for subsequent visualization, annotation and storage of results. PLINK 1.9 is improved and second generation of the software.

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• RRID-Legacy
• 5 years ago - by Anonymous

Centralised service facility for flow cytometry. Supports users in purification and analysis of (cell) samples using flow cytometry, FACS-based experiments from selection of experimental approach, provision of proven protocols and reagents, to performance of cell sorting as a service, equipment training and assistance with sample FACS-based analysis. Offers evaluation of FACS data and provides digital licences for common analysis software.

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• SciCrunch
• 3 months ago - submitted by Edyta Vieth

A vocabulary of taxonomic ranks intended to replace the sets of rank terms found in the Teleost Taxonomy Ontology, the OBO translation of the NCBI taxonomy and similar OBO taxonomy ontologies. It provides terms for taxonomic ranks drawn from both the NCBI taxonomy database and from a rank vocabulary developed for the TDWG biodiversity information standards group. Cross references to appearances of each term in each source are provided. Consistent with its intended use as a vocabulary of labels, there is no relation specifying an ordering of the rank terms.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool to provide color schemes for maps and other graphics designed by CARTO.Implementation of CARTOcolor palettes in R. It includes four types of palettes: aggregation, diverging, qualitative, and quantitative.

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• RRID-Legacy
• 5 years ago - by Anonymous

Core provides centralized services, consultation, training and technical support to advance transgenic animal genotyping and cardiovascular, metabolic and behavioral phenotyping research.

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• RRID
• 3 months ago - by Anonymous

An extension of the Ontology for General Medical Science (OGMS) that covers the four consensus human vital signs: blood pressure, body temperature, respiration rate, pulse rate. VSO provides also a controlled structured vocabulary for describing vital signs measurement data, the various processes of measuring vital signs, and the various devices and anatomical entities participating in such measurements.

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• SciCrunch
• 13 years ago - by Anonymous

Software R package for statistical analysis of phenotypic data.Tool kit for standardized analysis of high throughput phenotypic data.

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• RRID-Legacy
• 5 years ago - by Anonymous