Curator Dashboard

DataLad data distribution. Super dataset collating DataLad datasets from various sources including OpenNeuro, CRCNS, etc., to provide unified access to over 200TB of neural data.

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• RRID-Legacy
• 6 years ago - submitted by Yaroslav Halchenko

Software package for analysis of RNA expresison data. Used to make pythoneer bioinformatician workflow less colluded with R.

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• RRID
• 1 year ago - by Anonymous

An open source data sharing and visualization platform for neuroimaging data, that uses the OntoNeuroLOG ontology. Shanoir (Sharing NeurOImaging Resources) is an open source neuroinformatics platform designed to share, archive, search and visualize neuroimaging data. It provides a user-friendly secure web access and offers an intuitive workflow to facilitate the collecting and retrieving of neuroimaging data from multiple sources and a wizard to make the completion of metadata easy. Shanoir comes with many features such as anonymization of data, support for multicenter clinical studies on subjects or group of subjects. Shanoir offers an ontology-based data organization (OntoNeuroLOG). Among other things, this facilitates the reuse of data and metadata, the integration of processed data and provides traceability trough an evolutionary approach. Shanoir allows researchers, clinicians, PhD students and engineers to undertake quality research projects with an emphasis on remote collaboration. As a secured J2EE web application, it therefore allows you safely store and archive, with no more requirements than a computer with an internet connection. Furthermore, Shanoir is not only a web application: it is also a complete neuroinformatics platform in which you can easily integrate your existing processing tools or develop your own ones: see ShanoirTk. Shanoir is a project carried out by the VisAGeS Team, based at IRISA (INRIA Rennes - Bretagne Atlantique Research Centre). This software is released under QPL 1.0 license.

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• SciCrunch
• 14 years ago - by Anonymous

Core offers bioinformatics consulting and data analysis services to help researchers analyze and understand large data sets acquired from next generation sequencing and array based technologies.Bioinformatics staff members have extensive experience in bioinformatics, genomics, transcriptomics and translational informatics in plant, animal and microbial systems. Expertise includes big data analysis, statistical analysis, software development and high performance computing.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth

Transmission (TEM), Scanning (SEM), 2D tile scanning SEM and 3DSEM electron microscopy are available in the Core for imaging and analyzing specimens at the ultrastructural level. Possible samples include fresh tissue specimens, cultured cells growing on a substrate, cells in suspension or subcellular fractions (for purity determinations). Sub-cellular localization of antigens within cells by immunogold labeling can be performed, as well as negative staining for visualizing samples such as microparticles and exosomes. Elemental analysis (EDAX) is also available together with SEM.

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• RRID
• 1 year ago - submitted by Matthew Rudy

The Congress of Neurological Surgeons presents surgical videos on a variety of topics: Cerebrovascular, Pain, Pediatric, Peripheral Nerves, Spine, Functional/Epilepsy, and Tumor. You must have QuickTime player installed to view the videos but you can download this from the site. Cerebrovascular * Contralateral Microsurgical Approach to Multiple Aneurysms * Microsurgical Exosure and Clipping of an Ophthalmic Clinoidal Aneurysm Pain * Motor Cortex Stimulation for Chronic Pain * Pain Surgery * Spinal Cord Stimulation for Failed Back Syndrome * Treatment of Chiari I Malformation Pediatric * Occipitocervical Fusion in a Pediatric Patient:Use of a New Device Peripheral Nerves * Brachial Plexus Schwannoma in the Upper Trunk * Mini Open Carpal Tunnel Release * Ulnar Nerve Neurolysis and Subcutaneous/Submuscular Transposition Spine * Bilateral Thoracoscopic Sympathectomy * En Bloc Resection of Primary Cervical Spine Tumors * Endoscopic Thoracic Stabilization * Occipitocervical Fusion in a Pediatric Patient:Use of a New Device * Spinal Cord Stimulation for Failed Back Syndrome * Surgical Management of Spinal Cord Ependymomas * Thoracoscopic Discectomy * Treatment of Chiari I Malformation Functional/Epilepsy * Anteromedial Temporal Resection * STN Deep Brain Stimulation for Parkinson''s Disease Tumor * En Bloc Resection of Primary Cervical Spine Tumors * Insular Tumor Resection * Surgical Management of Spinal Cord Ependymomas * Surgical Resection of Brain Metastasis

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• SciCrunch
• 17 years ago - by Anonymous

Brings together Centers for Disease Control and Prevention, National Institutes of Health, Robert Wood Johnson Foundation, and U.S. Department of Agriculture to accelerate progress in reducing childhood obesity in America, to manage projects and reach common goals, to coordinate funding to make the most of available resources, to share insights and expertise to strengthen research. NCCOR focuses on efforts that have to benefit children, teens, and their families, and communities in which they live.

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• dkNET
• 6 years ago - submitted by Ko-Wei Lin

Provides research data management cyberinfrastructure and is developed and operated as not-for-profit service by the University of Chicago. Researchers can move, share, and discover data across multiple storage system platforms – from supercomputer to lab cluster, tape archive, public cloud or laptop. Globus provides services to design and execute secure, reliable automated task orchestration, across systems and at scale. Remote function execution services enable researchers to execute functions on diverse compute systems.

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• SciCrunch
• 14 years ago - by Anonymous

Repository of peer reviews of antibodies to help scientists find the right tools fast. Researchers from schools including Stanford, Harvard, John Hopkins have contributed reviews of over 1500 antibodies. Most of these reviews contain experimental details that are hard to find in publications and yet crucial for the success of antibody usage. In addition, scientists are enabled to connect through knowledge of expertise, as members are required to use their real names and lab affiliations. BenchWise is currently open to a select list of leading research institutes and is completely free. Scientists waste over 100 hours a year on either bad antibodies or finding out the right antibody usage condition, despite the fact that someone, somewhere likely has already done the same. They want to solve this problem by enabling scientists to share their product usage knowledge. Antibody records that are documented in spreadsheets are also accepted and will be parsed into individual reviews and uploaded to save you time.

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• SciCrunch
• 14 years ago - by Anonymous

Designed to provide supportive environment for interdisciplinary research and education with opportunities for students and faculty members alike with focus on biomolecules study with emphasis on proteins and protein interactions. Provides instrumentation and facilities for characterization of biomolecules and their role in variety of biomedical and environmental processes. Partnerships between Center and Idaho-BRIN/INBRE, UI, ISU, Boise VA Medical Center, College of Idaho, and Northwest Nazarene University. BRC provides seminars, training workshops, and other networking opportunities.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth

Weill Cornell Medicine, originally Cornell University Medical College, is the medical school of Cornell University, located on the Upper East Side of Manhattan in New York City.

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• RRID
• 1 year ago - submitted by Edyta Vieth

Software package for the integrative analysis of microarray based gene expression and histone modification data obtained by ChIP-seq. The package provides methods for data preprocessing and matching as well as methods for fitting bayesian mixture models in order to detect genes with differences in both data types.

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• SciCrunch
• 13 years ago - by Anonymous

Coordinated, centralized, and dedicated program for procuring, processing, dispersing and assessing all types of biospecimens together with downstream histology services. CAP Accredited.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth

Core for In Vivo and In Vitro metabolic phenotyping. Provides validated in vitro and in vivo tests. Phenotyping applications span from mitochondrial and cellular metabolism to whole body animal physiology. Provides instrument training, experimental design, data analysis. Studies can be performed by staff, but IACUC-approved Animal Use Protocols are also available to help investigators use resources on their own.

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• RRID
• 1 year ago - submitted by Melissa Kazantzis

Software application for discovering direct or indirect targets of transcription factors (TFs) using ChIP-chip or ChIP-seq, and microarray or RNA-seq gene expression data. Inputting a list of genes of potential targets of one TF from ChIP-chip or ChIP-seq, and the gene expression results, it generates a regulatory network of the TF.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool for mass downloading of historical clinical trial data from ClinicalTrials.gov.

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• SciCrunch
• 6 years ago - submitted by Benjamin Gregory Carlisle

Core provides tissue-based and clinical laboratory assays, biospecimens, consultative pathology services, multiparametric imaging, mass spectrometry, molecular pathology, mouse models and advanced cellular therapeutics for basic, translational, and clinical research.

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• SciCrunch
• 1 year ago - submitted by Edyta Vieth

Database supports use of mouse model system for human cancer by providing comprehensive resource for data and information on various tumor models.

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• SciCrunch
• 17 years ago - by Anonymous

Public research and land grant university in Auburn, Alabama. It is one of the state's two public flagship universities.

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• SciCrunch
• 16 years ago - submitted by Eddy Kim

Emory University, a top 20 research university located in Atlanta, Georgia, is an inquiry-driven, ethically engaged and diverse community whose members work collaboratively for positive transformation in the world through courageous leadership in teaching, research, scholarship, health care and social action. The university offers academic degrees and programs ( undergraduate, graduate and professional) through nine schools, with particular strengths in the arts and sciences, business, law, theology and the health professions. The university is recognized internationally for its outstanding liberal arts college, superb professional schools and one of the Southeast''s leading health care systems. Emory maintains an uncommon balance for an institution of its standing: it generates more research funding than any other Georgia university, while maintaining its traditional emphasis on teaching. The university is enriched by the legacy and energy of Atlanta, and by collaboration among its schools, units and centers, as well as with affiliated institutions.

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• SciCrunch
• 15 years ago - submitted by Stephen Larson