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The Human BAC Ends Database is a database of sequences from the ends of bacterial artificial chromosome (BAC) clones. A whole genome sequencing approach has been described in a map-as-you-go strategy. The complete sequence of a seed BAC is searched against a BAC end database and the minimally overlapping clones in each direction are selected for sequencing. As coverage increases, BAC end sequences provide samples for whole genome survey. It currently contains 743,000 end sequences from 470,000 clones (20 X clone coverage and 12% sequence coverage), generated by TIGR, UofWashington and CalTech, providing a sequence marker every 5 kb across the genome. The coverage by paired-ends on chromosome 22 is over 5X. The project is funded by DOE.

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• SciCrunch
• 17 years ago - by Anonymous

University of Washington is public research university in Seattle, Washington. Has university campuses in Seattle, Tacoma and Bothell, academic medical center and professional and continuing education programs.

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• SciCrunch
• 17 years ago - submitted by Timothy Tsui

Tulane University School of Medicine Department of Microbiology/Immunology Flow cytometry and cell sorting shared resource facility. Provides education, training and services, Applications include analysis and sorting of immune subsets and fluorescent-reporter expressing cells, DNA content, multi-plex bead assays and functional assays. Expert assistance with experimental design and data analysis, as well as instrument training, are available at no charge.

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• RRID
• 1 year ago - by Anonymous

NMP-db is a database of nuclear matrix associated proteins. The NMP-db consists of two parts. The first part is the actual literature based NMP-db, containing all nuclear matrix proteins (NMPs) that were originally found in PubMed. The second part is a database of homologues to the NMP-db proteins. This database is called NMP-db(hom) and contains proteins which have at least an HSSP-value of 55 to one of the proteins in the NMP-db. The NMP-db holds informations about the protein names, their organism and the cell-type in which NM association was observed. Also links to the respective PubMed abstracts are given in each entry. Additionally, we provide information about predictions of secondary structure, solvent accessibility, coiled-coil regions and domain-architecture, as well as the sequence, links to PDB (database of 3D-structures), molecular weight, theoretical pI, links to SWISS-2DPAGE, OMIM, PEP and many other databases. If available, we also list regions in a protein sequence that are known to be cruicial for NM-targeting. Finally, links to the S/MARt DB allow users to find DNA-regions that bind to NMPdb proteins.

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• SciCrunch
• 17 years ago - by Anonymous

Confederal university based in Cardiff, Wales. Founded by Royal Charter in 1893 as a federal university with three constituent colleges – Aberystwyth, Bangor and Cardiff – the university was the first and oldest university in Wales, one of the four countries in the United Kingdom.

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• SciCrunch
• 14 years ago - submitted by Stephen Larson

Software repository contains files needed to build the standard and its supplementary documentation. Changes are automatically pushed and built. Information about the SWC file specification.

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• RRID
• 1 year ago - submitted by Anita Bandrowski

Memorial Sloan-Kettering Cancer Center''s ontology of surgical secondary events (adverse events).

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• SciCrunch
• 13 years ago - by Anonymous

Provides microscopes for life science research, including number of confocals, widefield systems, slide scanners, and analysis packages. Provides analytic instruments such as flow cytometers, imaging systems, and PCR equipment among others. Our team consists of experienced biologists and are available to help you with experiment building, troubleshooting, and data analysis.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth

Software R package uses inverse probability weighting methods to estimate treatment effect under marginal structure model for the cause-specific hazard of competing risk events. Estimates also the cumulative incidence function (i.e. risk) of the potential outcomes, and provides inference on risk difference and risk ratio.

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• RRID
• 1 year ago - by Anonymous

A professional organization focused on advancing neurosurgery by providing members with the educational and career development opportunities. They have an annual meeting and offer CME opportunities. The Congress of Neurological Surgeons seeks to improve the quality of healthcare through: * The development of educational programs that convey knowledge, enhance self-directed learning and improve patient outcomes. * Advancing the science of medical education. * Promoting original inquiry and the exchange of clinical and scientific evidence. * Public advocacy for the enhancement of quality, safety and access to neurosurgical care. The Congress of Neurological Surgeons seeks to advance the profession of neurosurgery through: * Refining neurosurgical practice based on evidence. * Promoting volunteerism and leadership development within our specialty. * Development of programs to promote safety, quality and efficiency in practice for domestic and international members.

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• SciCrunch
• 17 years ago - by Anonymous

Center for excellence research in genomic medicine, focusing on the comprehensive study and understanding of the genetic basis of human diseases in general, placing special emphasis on cancer and its genetic disorders related to inheritance. GENYO was created as a multidisciplinary research space, where different professionals from the healthcare, university and business areas interact, making it possible to generate new systems to diagnose, prevent and treat diseases based on the joint and coordinated application of first-rate knowledge in the different areas of genetics. The center is the benchmark center of the Andalusian Program for Research in Clinical Genetics and Genomic Medicine, a program which, together with those of Cell Therapy and Regenerative Medicine, and Nanomedicine have the main objective of supporting and fostering translational research in Advanced Therapies. The activities performed within these three research programs are developed in coordination with the Andalusian Initiative for Advanced Therapies (IATA), an initiative of the Andalusian Government promoted by the Regional Ministries of Health and Innovation, Science and Enterprise.

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• SciCrunch
• 13 years ago - by Anonymous

Core provides investigators with access to imaging technologies and strategies to image live animals on organ, tissue, cell, or molecular level.Core for studying and monitoring disease in small living subjects.Performs noninvasive and nonlethal three-dimensional imaging. Equipped with instruments for micromagnetic resonance imaging, micropositron emission tomography, X-ray microcomputed tomography, bioluminescence and fluorescence scanning, and high-frequency ultrasound.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

This website allows visitors to search for genes of interest based on their spatial expression patterns in the Postnatal Day 7 mouse brain. Geneatlas provides two searching tools: A graphical interface for customized spatial queries; A textual interface for querying annotated structures. Geneatlas is the product of a collaboration between researchers at Baylor College of Medicine, Rice University, and University of Houston.

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• SciCrunch
• 17 years ago - by Anonymous

A government-funded research organization with the following missions: * To evaluate and carry out all research capable of advancing knowledge and bringing social, cultural, and economic benefits for society. * To contribute to the application and promotion of research results. * To develop scientific information. * To support research training. * To participate in the analysis of the national and international scientific climate and its potential for evolution in order to develop a national policy. As the largest fundamental research organization in Europe, CNRS carried out research in all fields of knowledge, through its seven institutes: * Institute of Biological Sciences (INSB) * Institute of Chemistry (INC) * Institute of Ecology and Environment (INEE) * Institute for Humanities and Social Sciences (INSHS) * Institute for Computer Sciences (INS2I) * Institute for Engineering and Systems Sciences (INSIS) * Institute of Physics (INP) and three national institutes: * National Institute for Mathematical Sciences (INSMI) * National Institute of Nuclear and Particle Physics (IN2P3) * National Institute for Earth Sciences and Astronomy (INSU) CNRS''s annual budget represents a quarter of French public spending on civilian research. This funding comes from various sources: * Government and public funding; * CNRS funds, primarily from industrial and EU research contracts and royalties on patents, licenses, and services provided.

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• SciCrunch
• 16 years ago - submitted by Andrea Stagg

Metabolomics and Machine Learning Core provides metabolite profiling and stable-isotope tracing, molecular modeling, and machine learning to integrate datasets across transcriptomic, proteomic, and metabolomic analysis.

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• SciCrunch
• 1 year ago - submitted by Edyta Vieth

The Amphibian Species of the World database has two searching tools, a BROWSE table and a SEARCH table. It provides needed information for research and conservation needs and to help illuminate where geographical data or taxonomic information are woefully inadequate. In addition, all underlined author names, dates, and publications may be clicked through to see other records citing this author, date, or publication. The basic structure of a taxonomic record is (1) Current scientific name, author and year of publication; (2) original name, authorship, citation, and if relevant, location of primary types and type locality (direct quotation if possible). This is followed by a synonymy composed of all new names, their authorship, literature citation, and (if relevant) location of primary types, and type locality as well as all new combinations and the literature source of the synonymy or combination; (3) published English names; (4) known or inferred distribution of the taxon; (5) comments to controversies or relevant taxonomic literature. A synonymy follows the currently recognized name. The synonymy includes synonyms and relevant combinations (in the sense of the International Code of Zoological Nomenclature, 1999) as well as deposition of types, type localities, and the source of the synonymy. Users who are looking for the synonymy to provide unerringly and precisely the names by which a taxon have been mentioned will be disappointed, and will be misled if they approach synonymies this way.

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• SciCrunch
• 17 years ago - by Anonymous

Hadassah Medical Center is an Israeli medical organization established in 1934 that operates two university hospitals at Ein Kerem and Mount Scopus in West Jerusalem as well as schools of medicine, dentistry, nursing, and pharmacology affiliated with the Hebrew University of Jerusalem.

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• SciCrunch
• 13 years ago - submitted by Andrea Stagg

Software R package for latent class analysis, short time Fourier transform, fuzzy clustering, support vector machines, shortest path computation, bagged clustering, naive Bayes classifier, generalized k-nearest neighbour.

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• RRID
• 11 months ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE, documented on Feb. 05, 2014, however, NIF holds the Research Crossroads data and makes it available through Integrated Grants. World of publicly funded research aggregated into a database providing funding, publication, clinical trial and grant data from government and private research agencies. Advanced reporting and analysis tools are then used to connect research to researchers, organizations and topic areas to uncover non-obvious associations. Use ResearchCrossroads for: Researchers * Make your research visible to funding organizations and collaborators. * Connect with peers to stay up to date on their research progress * Update your investigator profile, biography and publications so funding organizations can find you * Discover available funding from private foundations and government funding organizations * Annotate your previous research grants with outcomes * Create a research diary and participate in discussions with your peers Foundations Participating in ResearchCrossroads is free if you share your research data. Send us a spreadsheet with your grant and investigator information. * Create a community for your researchers to learn from each other * Locate potential investigators and collaborators * Post available funding and be matched with investigator profiles * Access to analytical reporting of funding and research statistics * Update your personalized organization profile page * Display your logo in search results * Link to your ResearchCrossroads grants and investigator profiles from your own website Corporations, Academia & Governments Contact us about subscriptions to funding trend analytics and marketing opportunities. * In-depth reporting of 15 years of funding data from government and private institutions * Subscriptions available to advanced analysis & reporting tools * Display your corporate logo in search results * Update your organization profile page * Highly targeted marketing & advertising by research areas, keywords and categories of investigator * Register for notifications of the newest grants in your area of interest

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• SciCrunch
• 17 years ago - by Anonymous

Passive and active source waveform data, event (earthquake) catalog, channel response data is available. This comprehensive data store of raw geophysical time-series data is collected from a large variety of sensors, courtesy of a vast array of US and International scientific networks, including seismometers (permanent and temporary), tilt and strain meters, infrasound, temperature, atmospheric pressure and gravimeters, to support basic research aimed at imaging the Earth's interior. IRIS also provides data and software for educational purposes. This consortium of over 100 US universities is dedicated to the operation of science facilities for the acquisition, management, and distribution of seismological data. IRIS programs contribute to scholarly research, education, earthquake hazard mitigation, and verification of the Comprehensive Nuclear-Test-Ban Treaty. Data is stored at the IRIS Data Management Center in Seattle, Washington. They currently manage a large archive from over tens of thousands of seismic stations and ship hundreds of terabytes of data yearly.

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• SciCrunch
• 14 years ago - by Anonymous