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Resource Report

Resource Name
Bioconductor
RRID:SCR_006442 RRID Copied      
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Bioconductor (RRID:SCR_006442)
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Resource Information

URL: http://www.bioconductor.org/

Proper Citation: Bioconductor (RRID:SCR_006442)

Description: Software repository for R packages related to analysis and comprehension of high throughput genomic data. Uses separate set of commands for installation of packages. Software project based on R programming language that provides tools for analysis and comprehension of high throughput genomic data.

Resource Type: software repository, software resource, software toolkit

Defining Citation: PMID:15461798

Keywords: catalog, analysis, genomic, metadata, comprehension, statistical, data

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This resource

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MSstats

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MetaCyto

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MetaNeighbor

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tximport

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clusterProfiler

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ropls

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FlowSOM

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scran

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Rsubread

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riboSeqR

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Biostrings

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ConsensusClusterPlus

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DESeq2

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GenomicFeatures

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affy

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affydata

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Genomic Ranges

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Goseq

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GAGE

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CATALYST

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Scmap

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Scfind

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GenomicRanges

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org.Rn.eg.db

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Extending Guilt by Association by Degree

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ggtree

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StructuralVariantAnnotation

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scTHI

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EnhancedVolcano

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DEGreport

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variancePartition

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biomaRt

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MSnbase

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ReactomePA

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SynergyFinder

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CiteFuse

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fgsea

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GSVA

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SimFFPE

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FilterFFPE

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PhenStat

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ChIPseeker

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AUCell

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svaNUMT

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KEGGgraph

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epialleleR

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microbiome

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Orthology.eg.db

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org.Hs.eg.db

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ExperimentHub

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combi

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OMICtools

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Gene Ontology Tools

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SoftCite

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RnaSeqGeneEdgeRQL

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asSeq

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Gene Ontology

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CRCView

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R Project for Statistical Computing

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GEO2R

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LIMMA

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VisR

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edgeR

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IMEx - The International Molecular Exchange Consortium

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CATALYSTLite

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ascend

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minet

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Fred Hutchinson Cancer Center

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ReadqPCR

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flowBin

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CorMut

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HEM

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SNM

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MiChip

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MACAT

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RAMA

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vsn

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DEGseq

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MMDiff

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LVSmiRNA

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les

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CYCLE

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DESeq

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rGADEM

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PICS

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R453Plus1Toolbox

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BAC

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targetscan.Hs.eg.db

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Qvalue

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NOISeq
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