URL: http://bioconductor.org/packages/epialleleR/
Proper Citation: epialleleR (RRID:SCR_023913)
Description: Software R package for calling hypermethylated variant epiallele frequencies at level of genomic regions or individual cytosines in next-generation sequencing data using binary alignment map files as input. Used for sensitive allele specific methylation analysis in next generation sequencing data. Used for sensitive detection, quantification and visualisation of mosaic epimutations in methylation sequencing data.
Resource Type: software toolkit, software resource
Defining Citation: DOI:10.1101/2022.06.30.498213
Keywords: BAM files, binary alignment map files, allele specific methylation analysis, methylation sequencing data, next generation sequencing data, hypermethylated variant epiallele frequencies calling,
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