Curator Dashboard

Core provides expertise in Next Generation Sequencing (NGS) technologies to provide users with full spectrum of genomic services, including microarray analysis (ie genotyping and methylation arrays), NGS library preparation, short-read and long-read sequencing, genotyping.

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• RRID
• 2 weeks ago - submitted by Edyta Vieth

A free software for Mac OS X which designs long oligos for DNA microarrays, primers for PCR, siRNAs, and more��

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• SciCrunch
• 13 years ago - by Anonymous

Core specializes in oral microbial genomics, taxonomy, phylogenetics and the next generation sequence (NGS) data analysis with both in house and cloud high performance computational resource. In addition to supporting funded bioinformatics projects, Bioinformatics Core will also provide computational support to Forsyth and other researchers for processing, analyzing, and interpreting biological data.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Web-based and standalone application that facilitates multi-omics data visualization, exploration, integration, and analysis by providing easy access to dedicated and interactive protocols. It implements classical ordination techniques and the inference of omics-based (multilayer) networks to mine complex biological systems, and identify robust biomarkers linked to specific contextual parameters or biological states.

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• RRID
• 1 week ago - submitted by Florian Johann Gustav Waleczek

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• SciCrunch
• 15 years ago - submitted by Andrea Stagg

Software R package used to karyoplots. Bioconductor package to plot customizable genomes displaying arbitrary data.

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• RRID-Legacy
• 5 years ago - submitted by Santosh Kumar

Human and Mammalian Brain Atlas (HMBA) is a comprehensive, multi-omic project under the BRAIN Initiative Cell Atlas Network (BICAN) designed to map whole-brain cell types, structures, and cross-species evolutionary relationships across humans and model mammals. Its First Major Release specifically focuses on the Basal Ganglia (BG), establishing a foundational baseline before expanding to the entire brain. Provides detailed, multi-modal reference map that classifies cell types and structures in the basal ganglia across humans and non-human primates.

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• RRID
• 3 days ago - submitted by Anita Bandrowski

Conducts world class collaborative research dedicated to finding cures for human disease, improving quality of life, and thus creating a legacy for its employees, partners, donors, and community. SBP is dedicated to discovering the fundamental molecular causes of disease and devising the innovative therapies of tomorrow. Has established major research programs in cancer, neurodegeneration, diabetes, and infectious, inflammatory, and childhood diseases. SBP is a U.S.-based, non-profit public benefit corporation, with operations in San Diego (La Jolla) and Orlando (Lake Nona) in Florida.

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• SciCrunch
• 16 years ago - submitted by Andrea Stagg

Center maintains database containing all phenotypical data collected by Research Projects and Ancillary collaborators, as well as RNAseq and genotype data.Provides access to data generated by NIDA center for genetic studies of drug abuse in outbred rats and additional research projects that use N/NIH heterogeneous stock (HS) outbred rats and Center’s core services that support genotyping and analysis.Alignes data generated in HS rats with FAIR (Findable, Accessible, Interoperative, Reusable) data management principles.Provides structured access to data associated with research papers produced by research projects that use HS rats.

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• RRID-Legacy
• 5 years ago - submitted by Anita Bandrowski

Software for searching DNA sequence databases for RNA structure and sequence similarities.

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• SciCrunch
• 13 years ago - by Anonymous

Core is registered in resources database of German Research Foundation under number RI_00444. Center origins in Medical Physics group, Dept. of Radiology, University Medical Center Freiburg, one of leading group in field of methodological developments in Magnetic Resonance Imaging and Spectroscopy and its application in clinics and research.Serves as platform for collaborations with partners in industry and research according to industrial quality and performance standards. Main branches of MRDAC include development of novel MR sequences and methods and design, implementation, and execution of pharmaceutical MR studies.Offers services such as teaching, training, and consulting.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

A software program for assembling shotgun DNA sequence data.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool for robust cell segmentation for fission yeast transillumination images.Used for robust segmentation of fission yeast micrographs, especially those with quality challenged images.

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• RRID-Legacy
• 5 years ago - submitted by Chunnan Hsu

A registry which provides links and reviews for material resources such as reagents, equipment, digital tools, and providers, as well as the companies that sell them. Users can search for specific materials or search by vendor, product, or service type.

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• SciCrunch
• 13 years ago - by Anonymous

Software R package for landscape and ecological associations studies.Dedicated to genomewide association tests in general, with emphasis on association with ecological gradients. Runs analyses of population structure and scans for genomic signatures of local adaptation.

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• RRID-Legacy
• 5 years ago - submitted by Brandon Pickett

Software package that detects statistically significant difference between read enrichment profiles in different ChIP-Seq samples.

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• SciCrunch
• 13 years ago - by Anonymous

Core supports access to and expertise in data management, analyses, and mapping and data visualization of population based databases. These databases are ideal for studies requiring access to large samples of patients and/or providers; examination of trends in treatment, screening, or other healthcare services; impact of policy changes or recommendations on healthcare services; investigating dissemination of evidence based technologies and interventions; disparities of treatment or other health care services between groups; geographic distributions of cancer patients and relationships with other geospatial data.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

An independent, not-for-profit organization, The Joint Commission accredits and certifies more than 19,000 health care organizations and programs in the United States. Joint Commission accreditation and certification is recognized nationwide as a symbol of quality that reflects an organization''s commitment to meeting certain performance standards. The Joint Commission is the nation''s oldest and largest standards-setting and accrediting body in health care. To earn and maintain The Joint Commission''s Gold Seal of Approval, an organization must undergo an on-site survey by a Joint Commission survey team at least every three years. (Laboratories must be surveyed every two years.) Our Mission: To continuously improve health care for the public, in collaboration with other stakeholders, by evaluating health care organizations and inspiring them to excel in providing safe and effective care of the highest quality and value. Vision Statement: All people always experience the safest, highest quality, best-value health care across all settings.

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• SciCrunch
• 16 years ago - by Anonymous

Facility equipped with instruments for optical and electron microscopy, and Flow Cytometry.Offers experimental design, equipment training, staff operated image acquisition, and image analysis. All users must be trained by Facility staff to access the equipment.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

A R package that enables the identification of protein binding footprints in DNase I hypersensitive sites sequencing (DNase-seq) data.

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• SciCrunch
• 13 years ago - by Anonymous