Curator Dashboard

A uniform core set of data elements (whose formal semantics are captured in OWL) for use in a Computer-Based Patient Record (CPR)

• Resource
• SciCrunch
• 13 years ago - by Anonymous

University in Denmark that has campuses located in Southern Denmark and on Zealand. The university offers a number of joint programmes in co-operation with the University of Flensburg and the University of Kiel.

• Organization
• SciCrunch
• 15 years ago - submitted by Andrea Stagg

Facility maintains and administers the chip high performance computing cluster. The chip cluster is built from more than 150 machines featuring Intel CPUs and NVIDIA GPUs.

• Resource
• RRID
• 1 year ago - by Anonymous

The Cypriot National Genetic Database is an online repository of information about inherited disorders in the Cypriot population. The Cypriot National Genetic Database results from the fruitful collaboration among several investigators from Erasmus Medical Center (The Netherlands) and Kypriako Idryma Erevnon Gia Ti Myiki Distrofia (Cyprus) encouraged by the Human Genome Variation Society and financially supported in part by the European FP6 INCO grant MedGeNet and by Asclepion Genetics in Switzerland.

• Resource
• SciCrunch
• 14 years ago - by Anonymous

Public university system in Texas, established by the Texas Constitution in 1876, comprising nine academic and six health institutions.

• Organization
• SciCrunch
• 12 years ago - submitted by Andrea Stagg

Core provides targeted and untargeted measurements of small molecule metabolites utilizing LC-MS, high-field NMR and GC-MS analytical platforms. We also perform quantitative lipidomics and oxylipns metabolic flux analysis, statistical and pathway analysis, and biological interpretation.

• Resource
• RRID
• 1 year ago - submitted by Cassie Sather

The Human Intermediate Filament Database is a continuously updated review of the intermediate filament field. It is hoped that users will contribute to the development and expansion of the database on a regular basis. Contributions may include novel variants, new patients with previously discovered sequence and allelic variants. Suggestions on ways to improve the database are also welcome. The entire database can be searched through the Browse and Search options. A number of different parameters can be used to search the database including unique identifier, intermediate filament, disease DNA variations, amino acid variations, domain, date accepted, author and abstract. Output from the search is returned in a table containing all the pertinent cross referenced information. Multiple sequence alignment can also be performed via the CLUSTALW program to determine cDNA or protein sequence conservation. The database is linked to multiple other resources including NCBI RefSeq, PDB, OMIM, UCSC genome browser, NCBI Gene, HomoloGene, PubMed and HGNC. In the case of HGNC, reciprocal links are also available from HGNC that links to Human Intermediate Filament Database. Due to the protein centric nature of the Human Intermediate Filament Database and the gene centric nature of HGNC, a HGNC record will potentially link to multiple records in this database due to the presence of alternative splicing. In such an event, the Human Intermediate Filament Database will present to the user a list of all the protein records resulting from the HGNC gene record. The database uses Jalview and Jmol applets for the visualization of multiple sequence alignment and structure respectively. The database contains information on disease phenotypes of a variety of different intermediate filament related diseases.

• Resource
• SciCrunch
• 17 years ago - by Anonymous

An academic organization in Burlington, Vermont. This university provides undergraduate, graduate and medical degrees.

• Organization
• SciCrunch
• 17 years ago - submitted by Stephen Larson

Core offers specialized services supported by research infrastructure, including flow cytometry, imaging mass cytometry (IMC), single-cell genomic sequencing, and dynamic live cell-culture imaging. Our facility is located in the Medical Sciences Building next to Queen’s Park, a central and convenient location for users across the Greater Toronto Area.

• Resource
• RRID
• 1 year ago - by Anonymous

Oncomine Research Platform is a partially-commercial suite of products for online cancer gene expression analysis dedicated to the academic and non-profit research community. Oncomine combines a rapidly growing compendium of 20,000+ cancer transcriptome profiles with a sophisticated analysis engine and a powerful web application for data-mining and visualization. Oncomine facilitates rapid and reliable biomarker and therapeutic target discovery, validation and prioritization. Oncomine was developed by physicians, scientists, and software engineers at the University of Michigan and is now fully supported for the academic and non-profit research community by Compendia Bioscience.

• Resource
• SciCrunch
• 17 years ago - by Anonymous

A private, coeducational, liberal arts college with the distinction of being the only historically black Roman Catholic institution of higher education located in the Gert Town section of New Orleans, Louisiana, USA.

• Organization
• SciCrunch
• 13 years ago - submitted by Andrea Stagg

Core produces and supplies liquid helium and nitrogen to the entire IFGW academic community. Laboratory is equipped with helium liquefier from Linde and nitrogen liquefier from Stirling Cryogenics. In addition, it maintains complex support infrastructure essential for production and distribution of cryogenic liquids.

• Resource
• RRID
• 1 year ago - submitted by Maria Emilia Seren Takahashi

SCOPPI is a database of all domain-domain interactions and their interfaces derived from PDB structure files and SCOP domain definitions. Interfaces are classified according to the geometry of the domain associations and are annotated with various interaction characteristics. Screenshots of all interfaces are available. More than 4,000 distinct types of domain interfaces are collected from Protein Quaternary Structure Server and Protein Data Bank. Given a pair of interacting domains, we define face as the set of interacting residues in each single domain and the pair of interacting faces as an interface. We investigate how the geometry of interfaces relates to a network of interacting protein families, such as how many different binding orientations are possible between two families or whether a family uses distinct surfaces or the same surface when the family has diverse interaction partners from various families. We show there are, on average, 1.2-1.9 different types of interfaces between interacting domains and a significant number of family pairs associate in multiple orientations. In general, a family tends to use distinct faces for each partner when the family has diverse interaction partners. Each face is highly specific to its interaction partner and the binding orientation. The relative positions of interface residues are generally well conserved within the same type of interface even between remote homologs.

• Resource
• SciCrunch
• 17 years ago - by Anonymous

Software tool as deep collaborative learning with application to study of multimodal brain development. Uses deep network to represent original data and then seeks their correlations, while also linking data representation with phenotypical information.

• Resource
• NIF
• 6 years ago - by Anonymous

Software R package in Bioconductor that communicates with Cytoscape via its REST API, providing access to the full feature set of Cytoscape from within the R programming environment. RCy3 has been redesigned to streamline its usage and future development as part of a broader Cytoscape Automation effort.Network biology using Cytoscape from within R.

• Resource
• SciCrunch
• 1 year ago - by Anonymous

An integrated exploration of biomedical literature and data. An anatomy viewer can be accessed and searches of PubMed literature are visualized as to the anatomical regions that they effect. PubAnatomy takes advantage of the 25-micron voxel level mouse brain structure annotation generated by the Allen Brain Institute and integrates Allen Brain Atlas gene expression data, relationships between brain regions and diseases for more efficient exploration of Medline database and gene expression data.

• Resource
• SciCrunch
• 17 years ago - by Anonymous

The Digital Curation Centre (DCC) is a world-leading centre of expertise in digital information curation with a focus on building capacity, capability and skills for research data management across the UK''s higher education research community. The Digital Curation Centre provides expert advice and practical help to anyone in UK higher education and research wanting to store, manage, protect and share digital research data. The DCC provides access to a range of resources including our popular How-to Guides, case studies and online services. Our training programmes aim to equip researchers and data custodians with the skills they need to manage and share date effectively. We also provide consultancy and support with issues such as policy development and data management planning.

• Resource
• SciCrunch
• 15 years ago - by Anonymous

Software gradient boosting (GBT, GBDT, GBRT, GBM or MART) framework based on decision tree algorithms, used for ranking, classification and other machine learning tasks.

• Resource
• RRID
• 11 months ago - by Anonymous

A Parkinson's disease portal that provides information, materials, and programs to help Parkinson's patients and their care partners manage their everyday lives. The Center aims to enhance the quality of life for people with Parkinson's and their care partners and increase public awareness and education on Parkinson's disease. It provides resources for regional support group meetings, referrals to regional physicians, allied health professionals, home care agencies, and other resources, and information on current therapies and research programa. It also provides materials such as informational pamphlets and booklets, videos, DVDs, newsletters, and educational materials.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

Institute that develops innovative methods in Computational Science and actively supports their take-up in industrial practice. The Institute combines mathematical and computational knowledge with a focus on algorithms bringing benefits to customers and partners.

• Organization
• SciCrunch
• 14 years ago - submitted by Andrea Stagg