Curator Dashboard

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. A database of over 700 retinal topography maps of a wide variety of species published in a diversity of journals. It has been assembled to assist vision and neuroscience researchers to locate and compare the distribution of retinal neurons within and across species. The maps can be searched by taxonomic or common name classification, cell type sampled, type of retinal specialization and staining/visualization method. Maps can be compared by selecting multiple maps and clicking the Compare Selected button. An interactive spreadsheet can be also downloaded.

• Resource
• SciCrunch
• 14 years ago - by Anonymous

Assists graduate students, staff and faculty launch, economize and expedite their research, especially when it involves DNA extraction and quality checks, targeted genotyping and DNA content analysis. Facilitates usage of complementary cores and assists with research planning and data analysis.AGL members have free lab access and reduced costs for services as well as one-on-one training and advising with AGL staff.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Database that organizes information on genomes including sequences, maps, chromosomes, assemblies, and annotations in six major organism groups: Archaea, Bacteria, Eukaryotes, Viruses, Viroids, and Plasmids. Genomes of over 1,200 organisms can be found in this database, representing both completely sequenced organisms and those for which sequencing is in progress. Users can browse by organism, and view genome maps and protein clusters. Links to other prokaryotic and archaeal genome projects, as well as BLAST tools and access to the rest of the NCBI online resources are available.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Software platform to integrate transcription factor gene interactions and validate regulatory networks. Gene regulatory network validation.

• Resource
• RRID
• 4 years ago - by Anonymous

Data archive to assist in the sharing of research grade information pertaining to the social and economic sciences. The majority of digital content currently consists of social science research data from experiments, program files with the code for analyzing the data, requisite documentation to use and understand the data, and associated files. Access to the ISPS Data Archive is provided at no cost and is granted for scholarship and research purposes only. When possible, Data is linked to Projects and Publications, via the ISPS KnowledgeBase. ISPS operates in accordance with the prevailing standards and practices of the digital preservation community including the Open Archival Information System (OAIS) Reference Model (ISO 14721:2003) and the Data Documentation Initiative (DDI) standard. Accordingly, ISPS supports digital life-cycle management, interoperability, and preferred methods of preservation. The ISPS Data Archive is intended for use by social science researchers, policy-makers, and practitioners who are conducting or analyzing field (and other) experiments in various social science disciplines. Currently, Replication Files originate with ISPS-affiliated scholars.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Core teams of technicians, veterinarians, pathologists and operations specialists offer services in diagnostic and research pathology and support development and maintenance of preclinical mouse models, including mice bearing humanized immune system. Provides access to high quality technical services and immune deficient mice. Can perform individual technical services or complete entire in vivo experiments. Facilities are fully accredited by Association for Assessment and Accreditation of Laboratory Animal Care International and comply with all U.S. Department of Agriculture, Public Health Service, Washington state and local area regulations.

• Resource
• SciCrunch
• 4 years ago - submitted by Cassie Sather

Satellite facility that downlinks, processes, archives, and distributes remote-sensing data to scientific users around the world. Three major components: * Satellite Tracking Ground Station: Part of NASA?s Near Earth Network system of ground stations around the world. * Synthetic Aperture Radar Distributed Active Archive Center (SAR DAAC): ASF maintains the NASA archive of SAR data from a variety of satellites and aircraft, and provides these data and associated specialty support services to U.S. Government-approved researchers in support of NASA?s Earth Science Data and Information System project. * ASF Enterprise Center (ASFE): In support of UAF?s mission to be a student-centered research university, the ASF-E focuses on applications of remote-sensing data, specifically for UAF research. The ASF-E includes the GeoData Center (GDC), which provides data management and archive services for UAF principal investigators and maintains a variety of geophysical data collections in support of scientific research.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Supports development, scale -up and processing of innovative cell based therapies for clinical studies.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Database of nucleotide sequences from several sources, including GenBank, RefSeq, TPA and PDB. Genome, gene and transcript sequence data provide the foundation for biomedical research and discovery.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

Nonprofit academic medical center established in 1883. One of the oldest and most distinguished pediatric hospitals in the United States. Affiliated with the University of Cincinnati Academic Health Center.

• Resource
• RRID
• 4 years ago - submitted by Edyta Vieth

Collection of chemical structures. Provides access to structures, properties and associated information from hundreds of data sources to find compounds of interest and provides services to improve this data by curation and annotation and to integrate it with users applications.

• Resource
• SciCrunch
• 14 years ago - by Anonymous

Software R package to flexible rearrange, reshape and aggregate data. Reshape2 is reboot of reshape package.

• Resource
• RRID
• 4 years ago - by Anonymous

Database of ~ 865 peptides where each record provides information on the food source, preparation, purification, reference(s) and any other additional information. The database provides a search and browsing option for a more personalized research experience.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Provides access to multi parental genetic reference mouse population derived from eight founder inbred strains, encompassing genetic diversity. Strains have been sequenced and have much genomic data. All of CC strains are kept as live mouse strains. Provides breeding stock for internal use unless other permission is acquired, or experimental cohorts.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Portal to neuroanatomical information on the Web that helps you identify structures in the brain and provides a variety of information about each structure by porting you to the best of 1500 web pages at 100 other neuroscience sites. BrainInfo consists of three basic components: NeuroNames, a developing database of definitions of neuroanatomic structures in four species, their most common acronyms and their names in eight languages; NeuroMaps, a digital atlas system based on 3-D canonical stereotaxic atlases of rhesus macaque and mouse brains and programs that enable one to map data to standard surface and cross-sectional views of the brains for presentation and publication; and the NeuroMaps precursor: Template Atlas of the Primate Brain, a 2-D stereotaxic atlas of the longtailed (fascicularis) macaque brain that shows the locations of some 250 architectonic areas of macaque cortex. The NeuroMaps atlases will soon include a number of overlays showing the locations of cortical areas and other neuroscientific data in the standard frameworks of the macaque and mouse atlases. Viewers are encouraged to use NeuroNames as a stable source of unique standard terms and acronyms for brain structures in publications, illustrations and indexing systems; to use templates extracted from the NeuroMaps macaque and mouse brain atlases for presenting neuroscientific information in image format; and to use the Template Atlas for warping to MRIs or PET scans of the macaque brain to estimate the stereotaxic locations of structures.

• Resource
• SciCrunch
• 17 years ago - by Anonymous

Provides bioinformatics research resources, services and training in support of existing research programs and in development of new programs and grant applications. Provides next-generation sequencing data analysis including RNA-Seq and QuantSeq analysis, de novo transcriptome assembly, whole-genome sequencing, genome resequencing, single-cell sequencing, metagenomics, microbiome, mass spectrometry proteomic analysis of label-free (DIA) and TMT data, analysis of metabolomics, microbiome, multi-omics data, data mining, modeling, and visualization. Provides customized bioinformatics and statistical services including data quality control, power studies, hypothesis tests, regression, clustering, network analysis, function annotation, pathway analysis including iPathwayGuide.

• Resource
• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Core to provide gene expression data analysis service. Activities range from the provision of services to fully collaborative grant funded investigations.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

Multi dimensional image viewer for Python. Used for browsing, annotating, and analyzing large multi dimensional images. Can be coupled to machine learning and image analysis tools enabling more user friendly automated analysis.

• Resource
• RRID
• 4 years ago - submitted by Anita Bandrowski

Online word processor for scientific and scholarly papers. Write, share, cite, comment, export, and track changes of articles in one place.

• Resource
• SciCrunch
• 14 years ago - by Anonymous

Software R package to work with sequence motifs in analysis of genomics data. These include methods to annotate genomic regions or sequences with predicted motif hits and to identify motifs that drive observed changes in accessibility or expression. Functions to produce informative visualizations of obtained results are also provided.

• Resource
• RRID
• 4 years ago - submitted by Kenneth Chiou