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Structural insights into the regulation of RyR1 by S100A1.

Gunnar Weninger | Marco C Miotto | Carl Tchagou | Steven Reiken | Haikel Dridi | Sören Brandenburg | Gabriel C Riedemann | Qi Yuan | Yang Liu | Alexander Chang | Anetta Wronska | Stephan E Lehnart | Andrew R Marks
Proceedings of the National Academy of Sciences of the United States of America | 2024

S100A1, a small homodimeric EF-hand Ca2+-binding protein (~21 kDa), plays an important regulatory role in Ca2+ signaling pathways involved in various biological functions including Ca2+ cycling and contractile performance in skeletal and cardiac myocytes. One key target of the S100A1 interactome is the ryanodine receptor (RyR), a huge homotetrameric Ca2+ release channel (~2.3 MDa) of the sarcoplasmic reticulum. Here, we report cryoelectron microscopy structures of S100A1 bound to RyR1, the skeletal muscle isoform, in absence and presence of Ca2+. Ca2+-free apo-S100A1 binds beneath the bridging solenoid (BSol) and forms contacts with the junctional solenoid and the shell-core linker of RyR1. Upon Ca2+-binding, S100A1 undergoes a conformational change resulting in the exposure of the hydrophobic pocket known to serve as a major interaction site of S100A1. Through interactions of the hydrophobic pocket with RyR1, Ca2+-bound S100A1 intrudes deeper into the RyR1 structure beneath BSol than the apo-form and induces sideways motions of the C-terminal BSol region toward the adjacent RyR1 protomer resulting in tighter interprotomer contacts. Interestingly, the second hydrophobic pocket of the S100A1-dimer is largely exposed at the hydrophilic surface making it prone to interactions with the local environment, suggesting that S100A1 could be involved in forming larger heterocomplexes of RyRs with other protein partners. Since S100A1 interactions stabilizing BSol are implicated in the regulation of RyR-mediated Ca2+ release, the characterization of the S100A1 binding site conserved between RyR isoforms may provide the structural basis for the development of therapeutic strategies regarding treatments of RyR-related disorders.

Pubmed ID: 38917010

Associated grants

  • Agency: NHLBI NIH HHS, United States
    Id: T32 HL120826
  • Agency: NHLBI NIH HHS, United States
    Id: R01 HL145473
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM129325
  • Agency: NIDDK NIH HHS, United States
    Id: R01 DK118240
  • Agency: NHLBI NIH HHS, United States
    Id: P01 HL164319
  • Agency: NINDS NIH HHS, United States
    Id: RF1 NS114570
  • Agency: NHLBI NIH HHS, United States
    Id: R25 HL156002
  • Agency: NINDS NIH HHS, United States
    Id: R25 NS076445
  • Agency: NHLBI NIH HHS, United States
    Id: R01 HL142903
  • Agency: NHLBI NIH HHS, United States
    Id: R01 HL140934

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