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URL: http://ingap.sourceforge.net/
Proper Citation: inGAP (RRID:SCR_005261)
Description: Software mining pipeline guided by a Bayesian principle to detect single nucleotide polymorphisms, insertion and deletions by comparing high-throughput pyrosequencing reads with a reference genome of related organisms. This pipeline is extended to identify and visualize large-size structural variations, including insertions, deletions, inversions and translocations.
Abbreviations: inGAP
Synonyms: inGAP-sv, inGAP-sv: structural variation detection and visualization, integrative next-generation genome analysis pipeline
Resource Type: software resource
Keywords: structural variation, genome, next-generation sequence, genome analysis, alignment, single nucleotide polymorphism, insertion, deletion, indel, inversion, translocation, windows, linux, macos/x, bio.tools
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