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URL: https://github.com/lh3/ropebwt2
Proper Citation: RopeBWT2 (RRID:SCR_002673)
Description: A software tool for constructing the FM-index for a collection of DNA sequences. It works by incrementally inserting one or multiple sequences into an existing pseudo-BWT position by position, starting from the end of the sequences. This algorithm can be largely considered a mixture of BCR and dynamic FM-index. Nonetheless, ropeBWT2 is unique in that it may implicitly sort the input into reverse lexicographical order (RLO) or reverse-complement lexicographical order (RCLO) while building the index.
Resource Type: software resource
Defining Citation: PMID:25107872
Keywords: standalone software, bio.tools
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Source: SciCrunch Registry
