URL: http://gigadb.org/dataset/100360
Proper Citation: VaDiR (RRID:SCR_015797)
Description: Method for uncovering mutations from RNA sequencing datasets that could be useful in further functional analysis. It also allows orthogonal validation of DNA-based mutation discovery by providing complementary sequence variation analysis from paired RNA/DNA sequencing data sets.
Abbreviations: VaDiR
Synonyms: VaDiR: an integrated approach to Variant Detection in RNA
Resource Type: algorithm resource, data analysis software, data processing software, sequence analysis software, software application, software resource
Defining Citation: DOI:10.5524/100360
Keywords: rna-seq, somatic variant calling, ovarian cancer, cancer genomes transcriptome, orthogonal validation, genetic mutation, sequence variation analysis, bio.tools
Funding: Biostatistics and Informatics Shared Resource (BISR) ; Cancer Center Cancer Biology program ; Department of Defense Ovarian Cancer Research Program W81XWH-10-1-0386; NCI P30 CA168524; University of Kansas Endowment Association
Availability: Free, Available for download
Resource Name: VaDiR
Resource ID: SCR_015797
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
