Curator Dashboard

Core facility provides nascent RNA sequencing using four techniques: Bru-seq, BruChase-seq, BruUV-seq, and BruDRB-seq. This service is all-inclusive, starting with cells and ending with basic data analysis. In addition, users will have access to our exclusive pipeline to perform further data analysis. Our areas of expertise are RNA isolation, cDNA library preparation, and sequencing data analysis.

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• 1 year ago - submitted by Edyta Vieth

Biological and life science product supplier.

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• 1 year ago - submitted by Victoria Coward

Software R package for ploidy and aneuploidy estimation using genotyping platform data. Focused on signal standardization to reduce noise for ploidy estimation and relies heavily on visual inspection of diagnostic plots.

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• 1 year ago - by Anonymous

Core is dedicated to protein analysis and applying mass spectrometry-based proteomic approaches to varied biological questions.

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• 1 year ago - submitted by Edyta Vieth

Offers microscopy instrumentation and services. Offers support and training on variety of high-end instrumentation and advanced methodologies for both light and electron microscopy, sample preparation services for electron microscopy, training and assistance with image analysis. Provides support across variety of open-source and commercial image analysis software packages.

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• 1 year ago - submitted by Edyta Vieth

Offers full-service sample analysis to measure concentrations of small molecules in biological samples. Services include targeted and untargeted metabolomic screening, method development to explore novel metabolic pathways and systems. Staff helps with interpretation and visualization of your data, and the preparation of grants, proposals, and manuscripts.

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• 1 year ago - submitted by Edyta Vieth

Core provides resources and services to prepare samples for analysis in epigenetic regulation in both genome-wide and locus-specific manners.

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• 1 year ago - submitted by Edyta Vieth

Core facility primary mission is to provide access to advanced NMR spectroscopic methods and tools to students, postdoctoral fellows, and faculty of the University for the advancement of their research.

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• 1 year ago - submitted by Edyta Vieth

Facility provides specialized MS services. The major areas of focus of the lab are Analysis of intact proteins, multi-protein complexes, and protein structure; Identification and purification of compounds from complex mixtures coupled with quantitative analysis.; Purification using mass directed autopurification liquid chromatography. Users can be trained on the instruments for walk-up use or samples can be submitted for analysis.

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• 1 year ago - submitted by Edyta Vieth

Nanotechnicum is a Biointerfaces Institute core facility providing Nanoparticle Size analysis and Zeta Potential characterization, Chiral materials spectroscopy, Material Pore Size and Porosity characterization, Materials Thermal analysis, and Biomolecular Binding characterization instrumentation and services. The Biointerfaces Institute offers instrumentation to the University of Michigan’s research community, fellow academic institutions, and industry.

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• 1 year ago - submitted by Edyta Vieth

Provides full-service consultation, sample processing and results. After running your samples, we will process your data using Mestranova and give you access to the raw data via email or Dropbox.

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• 1 year ago - submitted by Edyta Vieth

Core provides training, education, statistics and data management services. Services include: experimental design of new studies, advising on outcomes selection, determining or justifying sample size, designing randomization schemes,designing and writing the statistical analysis/modeling section(s), advising on appropriate database design and implementation methods, advising on the use of national data registries, health system data, grant writing on relevant sections within our specialties, creating custom databases and data entry portals for prospective studies, creating custom datasets or extracts from existing data sources for analysis, merging complex or multi-sourced data in concert with research aims and objectives, implementing blind, double-blind and other randomization schemes and more.

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• 1 year ago - submitted by Edyta Vieth

Software R package to access and explore existing scRNA-seq data from various public repositories. Supports downloading scRNA-seq data types, including raw data (SRA and ENA), count matrices (GEO, UCSC Cell Browser, and PanglaoDB), and processed objects (Zenodo, CELLxGENE, and HCA). Can access and explore existing scRNA-seq data, load output/downloaded count matrices and annotations to R (SeuratObject/DESeqDataSet), extract a subset of the SeuratObject based on cell metadata and genes, and merge multiple SeuratObjects if applicable. Provides format conversions between different scRNA-seq objects, including SeuratObject, AnnData, SingleCellExperiment, CellDataSet/cell_data_set, and loom.

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• 1 year ago - submitted by Yabing Song

Software tools for working with scATAC-seq fragment files.

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• 1 year ago - submitted by Seppe De Winter

Software R package for tidying output of statistical models.

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• 1 year ago - by Anonymous

Portal provides information, guidelines, data, services, and other resources aimed at supporting the research community in the Netherlands to share data related to pathogens and pandemic preparedness.

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• 1 year ago - by Anonymous

Software tool as lite implementation of tfmodisco, a motif discovery algorithm for genomics experiments. Rewrite of the original TF-MoDISCo code.

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• 1 year ago - submitted by Seppe De Winter

Software Java-based package for statistical natural language processing, document classification, clustering, topic modeling, information extraction, and other machine learning applications to text.

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• 1 year ago - submitted by Seppe De Winter

Software suite of population scale analysis tools for single-cell genomics data.

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• 1 year ago - submitted by Seppe De Winter

Core brings together expertise from across MSU to support research through advanced omics data analysis, grant proposal assistance, and tailored training for researchers at all career stages.

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• 1 year ago - submitted by Edyta Vieth