Curator Dashboard

GoSurfer uses Gene Ontology (GO) information to analyze gene sets obtained from genome-wide computations or microarray analyses. GoSurfer is a graphical interactive data mining tool. It associates user input genes with GO terms and visualizes such GO terms as a hierarchical tree. Users can manipulate the tree output by various means, like setting heuristic thresholds or using statistical tests. Significantly important GO terms resulted from a statistical test can be highlighted. All related information are exportable either as texts or as graphics. Platform: Windows compatible

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• SciCrunch
• 15 years ago - by Anonymous

Research facility for studying paramagnetic centers by continuous wave and pulsed EPR techniques to obtain information on electronic, chemical, and geometric molecular structures.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

A database that has been designed to facilitate the integration of data from high-throughput experiments carried out in Drosophila cell culture. It includes phenotypic information from published cell-based RNAi screens, gene expression data from Drosophila cell lines, protein interaction data, together with novel tools to cross-correlate these diverse datasets, such as the phenotype clustering tool Shuffle. We believe it will complement existing Drosophila databases and will prove useful to researchers working in other organisms who are looking for a simple way to navigate their way through the fly genome.

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• SciCrunch
• 17 years ago - by Anonymous

Core to leverage data, patient populations and investigators at each NCDRC institution, including accessing expertise and resources of regional Clinical and Translational Science Institute hubs (Duke, UNC, and Wake Forest). Research navigators in ACSMC provides input and navigation of clinical research resources available to diabetes investigators based on extensive experience in diabetes specific studies and methodology and deep knowledge of NCDRC resources available at each institution.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Core facility that provides the following services: Mouse breeding service, Mouse genotyping service, Tail vein injections service, Tissue service, Cancer mouse model service, Human tumor xenografts service.

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• SciCrunch
• 13 years ago - by Anonymous

One of the largest academic gnotobiotic mouse facilities internationally.Centrally managed gnotobiotic/germ free mouse facility located within centrally managed Knapp Center for Biomedical Discovery vivarium.GRAF currently maintains over 80 flexible film isolators with capacity for greater than 1045 mouse cages.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Computed Tomography (CT) at Children''s Hospital Boston helps doctors quickly answer urgent questions about your child''s health. In just seconds or minutes, CT scans can produce incredibly detailed, three-dimensional images of your child''s bone, tissue and blood vessels. CT exams in our powerful multi-detector scanners are quick, painless and non-invasive. Located at two locations: Boston and Waltham. Should be contacted about scanner technology, image acquisition, etc., but not for actual access to the facility.

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• SciCrunch
• 13 years ago - by Anonymous

Core research facilities include BioImaging Research Node which houses commercial and custom imaging systems and is focused on optical imaging; Tissue Engineering and Biomaterials Testing Research Node equipped with microfluidics 3D bioprinter and mechanical testers, which facilitate development of artificial 3D biological tissue models and biomechanical testing of different biomaterials and biomedical samples; Biochemistry and Molecular Biology Research Node which houses hypoxia chamber and systems for characterization and quantification of proteins, peptides, and nucleic acids; Cellular Biology Research Node to support development and use of 3D tissue models.It houses instruments including flow cytometer for phenotyping and performing functional testing of cells and bacteria, Seahorse Analyzer for evaluation of metabolic activity of cells, and Incucyte for live cell imaging of cells and tissues in culture.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

The primary mission of the Biostatistics Shared Resource (BSR) is to improve the statistical aspects of cancer research at Dartmouth by providing expert statistical collaboration for research projects of Cancer Center members. Because every aspect of cancer research involves data, all research programs potentially may require the participation of the BSR. Areas of special faculty expertise include clinical trial design, longitudinal data, statistical methods for genomics and managing data, measurement error methods, nonlinear dose response modeling, quality of life data, decision sciences, cost effectiveness analysis, and diagnostic test assessment. Faculty and staff offices are located on the 8th floor of the Rubin building at Dartmouth-Hitchcock Medical Center (DHMC). The BSR maintains an extensive statistical software library providing access to all major statistical analysis platforms. Server and network access are provided through Cancer Center administration, DHMC, and Dartmouth College. The BSR collaborates closely with other shared resources for project development and monitoring through the Office of Clinical Research, and the Integrative Biology and Experimental and Translational Models Shared Resources.

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• SciCrunch
• 13 years ago - by Anonymous

Provides access to microscopes, technical advice and expertise in preparing cells or tissues for immunofluorescence/confocal microscopy, live cell imaging, super resolution imaging, transmission electron microscopy, and immunoelectron microscopy.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

The Flow and Imaging Cytometry Resource provides research flow and imaging cytometry services to all investigators in the PCIMM at Children''s Hospital, Boston and Immune Disease Institute, HMS and the local scientific community on a case-by-case basis. With state of the art instrumentation, such as the standard configuration 3-lasers FACSAria located in BL2+-facility, 20-parameters 4-lasers FACSAria SORP and DIVA FACSVantage SE TurboSort?, the facility offers high speed cell sorting and complex analytical services, development of collaborative projects as well as consulting on design and development of new protocols and methods.

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• SciCrunch
• 13 years ago - by Anonymous

Software package to indicate if two groups are significantly different. Used to add significance brackets to ggplots.

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• RRID
• 4 years ago - by Anonymous

Core facility that provides the following services: Double- and triple-labeling experiments, Acquisition of high-resolution images: 2048 x 2048 pixels, Single molecule visualization, allowing dynamic observation and functional analyses of both in vivo and living cells, Total internal reflection fluorescence experiments (TIRF).

This Core consists of a Zeiss LSM 5 Pascal laser confocal microscope with a Zeiss RGB vario laser module and Nikon C1 Confocal/TIRF System with 3 PMT. A Zeiss Axiovert 200 fully motorized light microscope is available with fluorescence, bright-field, phase-contrast and Nomarski (DIC) capabilities. Image acquisition and analyses are performed using Zeiss LSM 5 Pascal Confocal Microscopy Software (Release 3.2) on 2 workstations. Zeiss Physiology software is available also. Live cell imaging is available using a Zeiss temperature controller with custom chamber and heating stage. The Nikon C1 Confocal/TIRF System fully motorized Nikon Eclipse Ti microscope is available with fluorescence, bright-field and TIRF capabilities. Imaging acquisition and analyses are performed using EZ-C1 and NIC-Elements Software.

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• SciCrunch
• 13 years ago - by Anonymous

Gastric cancer gene mutation data sample and clinical information data set. Accession number:EGAS00001000597.

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• RRID
• 4 years ago - submitted by Zhenzhang Li

Web application to discover resources available at participating networked universities. This distributed platform for creating and sharing semantically rich data is built around semantic web technologies and follows linked open data principles.

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• SciCrunch
• 16 years ago - by Anonymous

Provides services such as Pronuclear Injection, Blastocyst Injection, Embryo and Sperm Cryopreservation, Strain Recovery and Rederivation. Provides assisted reproductive techniques such as IVF and ICSI used for strain recovery. Core facility to the university for creation and maintenance of all transgenic animal models, refinement and development of new transgenic techniques, as well as training center for research personnel.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

The only national patient waiting list and an online database system, called UNet, that links all of the professionals involved in the donation and transplantation system for the collection, storage, analysis, and publication of all OPTN data pertaining to the patient waiting list, organ matching, and transplants. The system contains data regarding every organ donation and transplant event occurring in the U.S. since October 1, 1987. UNet is a fail-safe, 24/7, secure Internet-based transplant information database created to enable the nation''''s organ transplant institutions to: * register patients for transplants * match donated organs to waiting patients * manage the time-sensitive, life-critical data of all patients, before and after their transplants Data reports are available by type: National Data, Regional Data, State Data, Center Data, Build Advanced Report, and Annual Report Data. UNet is being used right now by all of the nation''''s organ transplant programs, organ procurement organizations, and histocompatibility (tissue typing) laboratories working cooperatively to efficiently share a limited number of donated organs among thousands of patients.

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• dkNET
• 16 years ago - by Anonymous

Core mission is to drive scientific discovery through use of human specimens.Helps facilitate translational research, match human specimen resources to scientific needs, foster multi-investigator collaborative projects, and catalyze scientific innovation,improving researcher access to existing biospecimen resources, and enhancing institution-wide tissue-banking efforts and capacity. Another priority is to implement campus-wide policy for human biospecimen collection and storage to ensure regulatory compliance.

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• SciCrunch
• 7 years ago - submitted by Edyta Vieth

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on November 22, 2023. A database containing genomic/biological information on anopheline mosquitoes, with an emphasis on Anopheles gambiae, the world''''s most important malaria vector. AnoBase is an integrated, relational database of basic biological and genetic data on anopheline species, with a particular emphasis on Anopheles gambiae. It has been designed as an information source and research support tool for the broad vector biology community. Although AnoBase is not a primary genomic database that develops and provides tools to access the genome of the malaria mosquito, it nevertheless contains several sections that offer data of genomic interest such as in situ hybridization images, an integrated gene tool and direct online access to AnoXcel, the proteomic database of An. gambiae. Moreover, AnoBase also contains information on non-gambiae mosquito species and a novel section on studies related to insecticide resistance.

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• SciCrunch
• 17 years ago - by Anonymous

Aston Publications Explorer is Aston University's repository for their open access publications. You may also be interested in Aston Data Explorer for Aston's research data and Aston Research Explorer for broader information about Aston's research work including research staff, awards and activities projects and research groups.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth