Curator Dashboard

Desktop application for operating Phenome Technologies circadian cabinets, running wheel cages and automated feeders in animal research facilities. PhenomeLab runs on Windows, macOS and Linux (x86-64 and arm64) and connects to cabinet and feeder hardware over a two-wire RS485 interface. It provides live monitoring of temperature, humidity and light level in each cabinet, per-cabinet light scheduling (multi-day light/dark schedules, custom T-cycles and intensity settings), and automated feeder scheduling and status monitoring with error logging. Running-wheel activity is imported from ClockLab (.clklb) files and displayed per subject as activity plots and actograms. Data are stored as CSV files for downstream analysis and can be sent to the PhenomeStudio server platform for centralized monitoring. PhenomeLab is distributed as a self-contained application with no runtime or installer dependencies and supports online or offline activation.

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• 3 weeks ago - submitted by Nathan Skinner

Automated pellet feeder for circadian, metabolic and behavioral studies in mice and rats. A rotating hopper delivers individual 30–300 mg Bio-Serv pellets into a metal chute that presents each pellet to the subject through the wire cage lid; each pellet taken is logged as a timestamped event in PhenomeLab software, giving a continuous per-subject record of feeding activity across the light/dark cycle. Timed delivery supports restricted and time-controlled feeding protocols. Feeders are available in single- or dual-cage configurations, fit standard Tecniplast caging (1144B, 1284L, GMX500) without cage modification, and communicate over a two-wire RS485 interface shared with Phenome Technologies circadian cabinets. An optional PIR sensor provides motion-based activity data for subjects without running wheels.

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• 3 weeks ago - submitted by Nathan Skinner

Light-tight housing cabinet for circadian rhythm, metabolic and behavioral studies in mice and rats. Each cabinet holds up to 12 mouse cages or 6 rat cages and provides programmable LED lighting (full-spectrum white, blue and red) for light/dark (LD) cycles and custom photoperiods, controllable via PhenomeLab software, TTL signals or standard lamp timers. Built-in sensor boards continuously record temperature, humidity and light level inside the cabinet. Fan-driven ventilation provides approximately 28 air changes per hour, with HEPA filtration and variable fan speed available. Cabinet controls, monitoring and automated feeders communicate over a two-wire RS485 interface. Optional configurations include heating to 31 °C for thermoneutral housing, integrated data rails for running wheels and other activity sensors, additional thermal insulation, sound attenuation, RF shielding, light-tight cable passes, specific-wavelength lighting, divided chambers and stacked mobile frames.

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• 3 weeks ago - submitted by Nathan Skinner

Core provides specialized aquatic and non-mammalian animal husbandry, facilities, and experimental support for research on tissue regeneration and aging. Provides care for animals and recirculation systems, C. elegans and drosophila media prep.

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• 3 weeks ago - submitted by Edward Seckeler

Open-access, interactive mapping platform developed by the University of Montana to bridge rural health data gaps and guide public health decisions across all 56 Montana counties.

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• 3 weeks ago - submitted by Erin Landguth

Core focuses on developing, optimizing, and applying individual based simulation programs for understanding relationships between biological processes, environment, and climate with population patterns across landscapes. Produces tools valuable to natural resource managers, planners, decision makers, and scientists with a stake in maintaining biodiversity, from genes to ecosystems. Provides open access individual based simulation software and high performance computing infrastructure.

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• 3 weeks ago - submitted by Erin Landguth

Core provides genomics solutions, from experimental design through sequencing. Our team offers full-service library preparation, high-accuracy sequencing on the Element Biosciences AVITI24, and access to the latest single-cell, spatial and epigenetic technologies.Our services include Next generation sequencing: RNA-seq, whole genome, whole exome and targeted sequencing; Epigenetic profiling: DNA methylation, ATAC-seq, CUT&RUN, CUT&Tag and TIP-ChIP, Single-cell multiomics: 10x Genomics Chromium X and Illumina PIP-seq; Spatial transcriptomics and epigenomics: Curio Trekker, Illumina StrataMap, 10x Visium HD and GeoMx DSP; In situ cell screening: Element Biosciences Cytos multiomic CRISPR and drug screening; Sample QC, STR cell line authentication and instrument training

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• 3 weeks ago - submitted by Edyta Vieth

Core provides single cell and spatial transcriptomics services, bioinformatics support, and imaging instrumentation, including confocal and light sheet microscopy.

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• 3 weeks ago - submitted by Edyta Vieth

Software analysis pipeline for ATAC-seq data.

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• 3 weeks ago - by Anonymous

Core houses several instruments dedicated to the structural analysis of crystalline materials, the determination of highly periodic morphologies in self-assembled systems over a large length scale range.

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• 3 weeks ago - by Anonymous

Software operational, evidence, provenance, and reproducibility infrastructure for the preregistered longitudinal audit of research software identity propagation across open scholarly infrastructures. This repository is research infrastructure and is not an eleventh object in the fixed ten-object study corpus.

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• 3 weeks ago - by Anonymous

Software application for visualizing, segmenting and measuring 3D and 4D images from confocal, light-sheet and electron microscopy and from micro-CT. Used for GPU volume and surface rendering, deep-learning and watershed nuclei segmentation, object counting and measurement, spot detection, filament tracing, colocalisation, tracking over time and deconvolution, with export of measurements, images and movies. Runs on Windows and macOS.

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• 3 weeks ago - submitted by Edyta Vieth

Open-science community and characterization database designed to fix the widespread problem of unreliable research antibodies in biomedical science. Led from the University of Leicester in collaboration with YCharOS and numerous global partners, the platform provides independent, knockout-controlled validation data to help researchers choose reagents that actually work. Community and toolbox to make best practices in antibody choice and use feasible, easy and rewarding.

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• 3 weeks ago - submitted by Anita Bandrowski

delete this test

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• 3 weeks ago - submitted by Anita Bandrowski

Software algorithm for quantifying drug effect synergy. Used for quantifying drug synergy along axes of potency and efficacy. MuSyC quantifies the synergy of a drug combination.

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• 1 month ago - by Anonymous

AutoDiscovery is a specialized exploratory data analysis (EDA) and automated hypothesis generation platform developed by Butler Scientifics. Designed specifically for translational medicine, biomarker discovery, and clinical researchers, it systematically explores multivariable relationships, performs automated hypothesis testing, applies False Discovery Rate (FDR) and Benjamini-Hochberg corrections to prevent false discovery, and produces auditable analytical reports. It supports clinical cohort screening, stratification analysis, and exploratory analysis of high-dimensional biomedical data.

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• 1 month ago - submitted by Ray G. Butler

Continuous flow system capable of analyzing, sorting and dispensing objects ranging in size from 10 to 1,500 µm. Relative axial size is measured by an axial light-loss detector and optical density is determined by the total integrated signal of the light blocked.Fluorescence intensity can be simultaneously measured at three different wavelengths as determined by the excitation and emission filters in the system.System is controlled by a Windows based workstation utilizing FlowPilot or FlowPilot-Pro software with real-time data acquisition via on-board customized electronics. Additional copies of the software are available for off-line post-run data analysis. Used to automate the high-throughput analysis, gentle sorting, and precision dispensing of large or fragile biological samples.

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• 1 month ago - by Anonymous

Specialized benchtop microscope system designed specifically for ultra-sensitive bioluminescence imaging of living cells and tissue slices. LV200 detects the natural light produced by chemical reactions inside living cells.

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• 1 month ago - by Anonymous

Facility houses NMR spectrometers and an EPR spectrometer in the Department of Chemistry and Biochemistry. These spectrometers are equipped with various probes and other key accessories for general and specialized applications.

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• 1 month ago - by Anonymous

Web tool provides free collection of DNA and protein sequence tools and lab calculators that run in the web browser, including reverse complement, translation, ORF finder, restriction maps, pairwise alignment, primer Tm, CRISPR guide finder, codon optimization, plasmid maps, and molarity, dilution, qPCR ΔΔCt and IC50 calculators.

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• SciCrunch
• 1 month ago - by Anonymous