Curator Dashboard

Software application as open source research basecaller for Oxford Nanopore reads.

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• 8 months ago - by Anonymous

Provides optical microscopy tools to advance research in human cognition. Offers both commercial turnkey microscopes and in-house developments based on emerging techniques.

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• 8 months ago - by Anonymous

Nextflow pipeline to process whole genome long-read sequencing data generated in the context of ASAP project.

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• 8 months ago - by Anonymous

Core provides advanced computational analysis and consultation for high-throughput genomics and multi-omics research. Supports investigators across GW and external collaborators with experimental design, data processing, statistical analysis, and biological interpretation of next-generation sequencing datasets. Offers expertise in bulk and single-cell transcriptomics, epigenomics, variant analysis, and integrative multi-omics approaches. Develops and maintains reproducible computational pipelines and collaborates closely with researchers to translate complex genomic data into actionable biological insights.

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• 8 months ago - submitted by Hovhannes Arestakesyan

Bonito is an open source research basecaller for Oxford Nanopore reads.

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• 8 months ago - submitted by Vasileios Konstantakos

Software aplication to predict scRNA-seq coverage and scATAC-seq insertion profiles along the genome at single-cell resolution. It leverages the pre-trained multi-omics profile predictor Borzoi as a foundation model, equips it with a cell-specific decoder, and fine-tunes its sequence embeddings.

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• 8 months ago - submitted by Vasileios Konstantakos

Web-based resource for preserving and sharing pharmacokinetic data generated through preclinical and clinical HIV research.

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• 8 months ago - submitted by Anita Bandrowski

NIEHS funded biomedical knowledgebase to provide a curated collection of geospatial datasets and associated information. It enables, data discoverability, data harmonization and data re-uses of GeoSpatial datasets in the USA. GeoSpace has three core modules.

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• 8 months ago - submitted by Anita Bandrowski

Centralized, annotated repository for the Osteoarthritis Initiative (OAI) study, designed to accelerate research by organizing and linking extensive clinical, imaging (MRI/X-ray), and biomarker data. It aims to help researchers analyze knee osteoarthritis prevention, treatment, and progression.

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• 8 months ago - submitted by Anita Bandrowski

Bioinformatics knowledge base and datacenter focusing on skeletal phenotypes. Provides searchable bone phenotyping data for knockout mouse lines, interactive histomorphometry plots, and raw data, supporting research into skeletal genetics, disease mechanisms, and personalized skeletal health treatments.

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• 8 months ago - submitted by Anita Bandrowski

Web application to search data on BRCA1/2 genetic variants and corresponding clinical data from around the world. Used to search for BRCA1 or BRCA2 variants.

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• 8 months ago - submitted by Anita Bandrowski

Software tool to find combinations of objects within categories. Can be utilized in bioinformatic analyses to transform two-mode target-pathway relationships to one-mode target-target relationships to generate combination of target genes within related pathways.

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• 8 months ago - by Anonymous

The UV photolithography system transfers patterns onto semiconductor wafers using ultraviolet light. A patterned mask exposes photoresist to define microscopic structures. This process is fundamental to microelectronics fabrication.

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• 8 months ago - submitted by Texas State CRO

The Tergeo plasma cleaner removes organic contaminants from sample surfaces using plasma. This improves sample cleanliness and imaging quality. It is commonly used before microscopy or surface analysis experiments.

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• 8 months ago - submitted by Texas State CRO

The critical point dryer removes liquids from delicate samples without causing structural damage. It replaces liquid with gas at a critical point where surface tension disappears. This technique is commonly used in electron microscopy sample preparation.

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• 8 months ago - submitted by Texas State CRO

The hydraulic pellet press compresses powdered materials into solid pellets using high pressure. These pellets can then be analyzed using spectroscopic techniques. The instrument is widely used in materials and chemical analysis laboratories.

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• 8 months ago - submitted by Texas State CRO

The wire saw cuts fragile or hard materials using a thin moving wire and abrasive slurry. This method produces very precise cuts with minimal mechanical stress. It is frequently used for slicing semiconductor wafers and crystal samples.

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• 8 months ago - submitted by Texas State CRO

The precision saw cuts samples with high accuracy while minimizing material damage. It is used to prepare wafers, ceramics, and other hard materials for further analysis. The instrument is essential for sample preparation in research laboratories.

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• 8 months ago - submitted by Texas State CRO

The Mastersizer 3000+ measures particle size distribution using laser diffraction. It analyzes how particles scatter light to determine their size range. This instrument is commonly used in materials science and pharmaceutical research.

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• 8 months ago - submitted by Texas State CRO

The cryostat maintains extremely low temperatures for cutting frozen biological or materials samples. It allows researchers to prepare thin sections while preserving sample integrity. Cryostats are commonly used in pathology and biological research.

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• 8 months ago - submitted by Texas State CRO