Curator Dashboard

Software R package for retrieving data from 'DeltaBreed' breeding data management platform.

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• RRID
• 2 months ago - by Anonymous

RUCDR is a biobank and a service organization that maintains human blood, serum, saliva, tissue and the genetic products derived from those. Services include technical consultation and logistical support for biobanking. Researchers can order biomaterials and apply for phenotypic / genotypic data.

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• SciCrunch
• 16 years ago - by Anonymous

Software pipeline for creating harmonized single cell RNA-seq dataset for retina with publicly available data. Platform for analysis of single cell eye in disk. Snakefile based process to turn 1.4 million ocular cells into unified meta-atlas. Meta-atlas that compiles 1.2 million single-cell back of the eye transcriptomes across studies, publications, and species.

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• SciCrunch
• 5 years ago - submitted by David McGaughey

The Mitochondrial Function and In Vivo Imaging (MF-II) Core provides specialized expertise, advanced instrumentation, and comprehensive services for assessing mitochondrial function, metabolism, cardiopulmonary physiology, and in vivo structure and function. The Core supports cardiovascular, pulmonary, and vascular research through high-resolution metabolic and mitochondrial analyses, noninvasive imaging, hemodynamic assessment, and established preclinical disease models. The MF-II Core works collaboratively with investigators to provide experimental design consultation, technical expertise, data acquisition, and analysis to generate high-quality, reproducible data.

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• RRID
• 2 months ago - submitted by Peng Zhang

A federally designated, non-profit organ procurement organization that coordinates organ and tissue donation in the six New England states and Bermuda.

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• SciCrunch
• 16 years ago - by Anonymous

Portal offers features to help discover associations between genes, variants, and traits including Browse and rank gene and variant associations identified by Locus-to-Gene (L2G) scoring pipeline, Uncover credible sets for variant and trait associations based on mapping analyses pipeline, Explore and compare studies from UK Biobank, FinnGen, and GWAS Catalog using multi-trait comparison tool eQTL Catalogue.

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• dkNET
• 5 years ago - submitted by Ko-Wei Lin

Core provides advanced instrumentation and expertise for the identification, characterization, and quantification of chemical compounds in a wide range of research samples. Instrumentation and capabilities include liquid chromatography-quadrupole time-of-flight mass spectrometry (LC-QTOF), gas chromatography-mass spectrometry (GC-MS), high-performance liquid chromatography (HPLC) with diode array, fluorescence, and refractive index detection, inductively coupled plasma-optical emission spectrometry (ICP-OES), Fourier-transform infrared spectroscopy (FTIR), UV-Vis-NIR spectroscopy, and fluorescence spectroscopy. Provides expertise in analytical method development and optimization, sample preparation and analysis, data analysis and interpretation, experimental design, and training in analytical instrumentation and methods.

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• RRID
• 2 months ago - submitted by Robert Tracy

Data analysis service for the standardized analysis of the immunoglobulin (IG) and T cell receptor (TR) rearranged nucleotide sequences. It identifies the variable (V), diversity (D) and joining (J) genes and alleles by alignment with the germline IG and TR gene and allele sequences of the IMGT reference directory. New functionalities were added through a complete rewrite in Java. IMGT/V-QUEST analyses batches of sequences (up to 50) in a single run. IMGT/V-QUEST describes the V-REGION mutations and identifies the hot spot positions in the closest germline V gene. IMGT/V-QUEST can detect insertions and deletions in the submitted sequences by reference to the IMGT unique numbering. IMGT/V-QUEST integrates IMGT/JunctionAnalysis for a detailed analysis of the V-J and V-D-J junctions, and IMGT/Automat for a full V-J- and V-D-J-REGION annotation. IMGT/V-QUEST displays, in ''Detailed view'', the results and alignments for each submitted sequence individually and, in ''Synthesis view'', the alignments of the sequences that, in a given run, express the same V gene and allele.

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• SciCrunch
• 13 years ago - by Anonymous

Software as cloud based community driven repository to store, share, and publish traumatic brain injury research data. Aims to increase transparency with individual level data, enhance collaboration, facilitate advanced analytics, and conform to increasing mandates by funders and publishers to make data accessible. Members of ODC-TBI have access to private digital lab space managed by PI or multi-PIs for dataset storage and sharing. PIs can share their labs’ datasets with registered members of ODC-TBI community and make their datasets public and citable. ODC-TBI implements stewardship principles that scientific data be made FAIR (Findable, Accessible, Interoperable and Reusable).

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• dkNET
• 5 years ago - submitted by Jeffrey Grethe

Public university in New Zealand that offers degrees in areas such as the arts, business, education, medical and health science, and law.

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• SciCrunch
• 17 years ago - submitted by Stephen Larson

An online database for miRNA target prediction and functional annotations.

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• SciCrunch
• 13 years ago - by Anonymous

Electrophysiology core facility that is part of Ion Channels and Transporters in Immunity Research Program.Research area includes ion channel and transporter function and ionic signaling in immune cells.Users who are studying other cell types or organ systems are welcome.Provides assistance with experimental design, training, implementation, and data analysis.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

iCORE Proteomics, previously known as Advanced Proteomics Platform (A~PROMPT) provides proteomics service for research in Singapore. Services include instrumentation use, Protein ID, Whole proteome ID, Targeted proteomics, Labelled free quantitation proteomics (LFQ), TMT proteomics, Post-Translational Modifications proteomics (phospho/Ubi PTM), Clinical proteomics, DIA-proteomics.

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• RRID
• 1 month ago - submitted by Edyta Vieth

A Perl based tool for the identification of differentially enriched regions in tiling microarray data.

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• SciCrunch
• 13 years ago - by Anonymous

Web visualization tool that provides access to interactive exploration of pancreatic islet genomic data. Allows access and exploration of pancreatic islet epigenomic and transcriptomic data produced by different labs worldwide.

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• dkNET
• 5 years ago - submitted by Ko-Wei Lin

public land-grant research university in Stillwater, Oklahoma, United States. The university was established in 1890 under the legislation of the Morrill Act.

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• RRID
• 1 month ago - submitted by Edyta Vieth

Nonprofit, nonpartisan think tank that helps people build meaningful lives. Center for Regional Economics and California Center.

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• SciCrunch
• 13 years ago - submitted by Andrea Stagg

Software package for experimental control from Vision and Cognition Lab at Netherlands Institute for Neuroscience. Matlab based software for fMRI, Psychophysical experimentation and NHP training, with eye control using Measurement and Computing IO card. Interfaces with ISCAN eye tracker and communicates with the MRI console using trigger pulses. Uses Psychtoolbox3 graphics and control engine.

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• RRID-Legacy
• 5 years ago - submitted by Chris Klink

Core is equipped with high-capacity instruments including Illumina NovaSeq systems to process whole genome samples. Provides automated, scalable research sequencing workflows supporting academic, clinical, and industry partners.

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• RRID
• 1 month ago - submitted by Anita Bandrowski

Computes both spliced and unspliced alignments at high accuracy while taking advantage of base quality information and splice site predictions.

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• SciCrunch
• 13 years ago - by Anonymous