We support boolean queries, use +,-,<,>,~,* to alter the weighting of terms
Software pipeline that improves T cell characterization by simultaneously quantifying predefined gene expression programs (scRNA-Seq) capturing activation states and cellular subsets. Used to score cells based on a fixed, multidataset catalog of Gene Expression Programs from any tissues or cell-type.
CARMOD (characterization and modelling) meta-platform is a core research and technology unit within the Biomechanics and Bioengineering (BMBI) laboratory at the University of Technology of Compiègne.Interdisciplinary core facility dedicated to the mechanical characterization of biological systems, tissues, and biomechanical signals. Provides technological platforms dedicated to the characterization and modeling of biomechanical systems and electrophysiological signals. Offers expertise spanning various scales from the nanoscale to the entire organ in vivo as well as various characterization modalities and physical and numerical modeling.
Software tool for querying and parsing of Genome Taxonomy Database's data.Command-line tool for querying the Genome Taxonomy Database (GTDB) directly from your terminal or scripts. It covers the core GTDB REST API, genome cards, metadata, taxonomic history, taxon lineages, and search, and adds features designed for real research workflows: batch input from files or stdin, automatic pagination, retry logic, flexible output formats (JSON, CSV, TSV), and per-item file splitting for large datasets.
Software R package to create scatterpie plots, especially useful for plotting pies on a map. Used to display proportional or compositional data across spatial coordinates (such as maps) or scatter plot axes.
Stratagene UV crosslinker is designed to crosslink DNA or RNA to nylon, nitrocellulose, or nylon-reinforced nitrocellulose membranes. The crosslinking process takes only 25–50 seconds, in contrast to the traditional method of baking filters at 80°C for 2 hours. Additionally, crosslinking has been shown to significantly increase hybridization signals when compared to oven-baking. For optimal crosslinking performance, each Stratalinker UV crosslinker is equipped with an internal photodetector designed to compensate for the natural shift in power output of aging ultraviolet bulbs.
Ultra-micro UV spectrophotometer used in life science and biology labs to measure the concentration and purity of DNA, RNA, and protein samples. Measures DNA and RNA concentrations at a fixed wavelength of 260 nm.Measures purified protein concentration at 280 nm. Requires only 1 to 2 ul of sample, eliminating the need for cuvettes or capillaries.
Confocal laser scanning microscope used to capture high-resolution, multi-color 3D images of biological samples. It is primarily used in neuroscience, cell biology, and developmental biology to image both fixed tissues and live cells. Detects from 400 nm to 900 nm. Supports up to 10 laser lines for advanced, simultaneous multiplexing.
Faxitron MultiFocus (now part of the Hologic portfolio) is a benchtop digital X-ray system designed for high-resolution specimen imaging, life sciences, and industrial applications. It features advanced Automatic Exposure Control and high geometric magnification for precise analysis
Core provides mass spectrometry resources and expertise to assist researchers in the identification and characterization of proteins and peptides. Experiments from simple protein discovery to complex differential proteome profiling, post-translational modification mapping and protein/peptide quantification can be performed using our instrumentation and software.
Open-access structural database dedicated to the exploration, analysis, and design of protein nanopores, which serve as essential molecular gateways in biological membranes and form the basis of many advanced biosensing and sequencing technologies. This platform integrates large-scale structure-guided mining and deep learning-based modeling using AlphaFold-Multimer and AlphaFold3 to provide high-confidence multimeric nanopore structures. Each entry includes detailed information on membrane embedding, pore geometry annotation, and constriction profiling to support functional and biophysical interpretation.
Austrian company that develops and manufactures high-end laboratory, analytical, and process measurement instruments. Their equipment is widely used in scientific research, quality control, and manufacturing.
Software integrative analysis pipeline for analyzing bulk/single-cell ATAC-seq and RNA-seq data. Integrative multi-omics data analysis framework. It can be used as a standalone pipeline to analyze ATAC-seq, RNA-seq, single cell ATAC-seq or Drop-seq data. Used to integrate diverse datasets and use these information to construct regulatory network and identify candidate driver genes.
The MagMAX Cell-Free DNA Isolation Kit is designed for enrichment of circulating cell-free DNA (cfDNA) and optimized for use with biological samples such as serum and plasma. The kit is based on MagMAX magnetic-bead technology, enabling reproducible recovery of high-quality DNA that is suitable for a broad range of applications, including real-time PCR, digital PCR, and next-generation sequencing.
This kit provides a protocol for extracting DNA from 300 μl of blood, perfectly matched with the CWE9600. After adding the reagents to the 96 DW deep-well plate as required, place the plate into the CWE9600 in the corresponding order. High-quality DNA can be obtained in approximately 50 minutes. The extracted DNA is stable and reliable, suitable for downstream experiments such as PCR, microarray analysis, and high-throughput sequencing.
This 3,300 square foot clean room is located in the Department of Physics in Regents Hall and includes instrumentation for fabrication and characterization of materials and electronic devices. Users have access to a Scanning Electron Microscope with ebeam lithography and EDS; optical lithography; magnetron sputtering; thermal evaporation; reactive ion etching; atomic layer deposition; chemical vapor deposition; wirebonding; a profilometer and various optical microscopes.
Software R package implementing the UMAP dimensionality reduction method. It also provides means to transform new data and to carry out supervised dimensionality reduction.
Software R package for rich hierarchy of sparse and dense matrix classes, including general, symmetric, triangular, and diagonal matrices with numeric, logical, or pattern entries. Efficient methods for operating on such matrices, often wrapping the 'BLAS', 'LAPACK', and 'SuiteSparse' libraries.