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Core facility provides infrastructure and services to academic researchers, biotech companies and industry partners that need vectors or cell culture models for their studies. Focuses on generating cell models, genetic modification, viral vector development, and advanced flow cytometry analysis.
Core dedicated to developing, characterizing, and distributing gene-edited rabbit models for biomedical studies. Team specializes in rabbit embryology, molecular biology, and animal reproduction, including developing Rabbit Gene Editing Technology (RbGET) workshops. Provides services including generating novel, customized gene-edited models (knockout/knock-in), and conducting preclinical, proof-of-concept studies to support drug development.
Core provides specialized, high-dimensional immune profiling for clinical and translational studies. It enables researchers to analyze immune responses using advanced flow cytometry, CyTOF, genomics, and cytokine analysis, helping to improve cancer treatments and patient outcomes.
Non-profit, specialized repository in Toronto that collects, stores, and distributes high-quality biospecimens—such as blood and bone marrow—from patients with hematologic malignancies. It supports worldwide research on leukemia and blood disorders to improve diagnosis and treatment.
Global medical technology company specializing in high-quality plastic laboratory products for diagnostics, biotechnology, and pharmaceutical industries. With over 60 years of experience, they produce VACUETTE® blood collection systems, CELLSTAR® cell culture products, and specialized labware for sample storage.
Seattle-based biotechnology company founded in 2006 that provides high-resolution, Next Generation Sequencing (NGS)-based genotyping services and kits for complex immune regions. They specialize in HLA, KIR, MIC A/B, and Fc receptor typing to support transplant programs, disease research, and clinical laboratories.
West Sacramento-based biotechnology company founded in 1985 that specializes in manufacturing cell culture and process liquid solutions for the biotech, cell therapy, and gene therapy industries. They operate cGMP-compliant facilities providing products like human serum, buffers, and media to support drug development from research to commercial production.
Scripts used to process data for the first McCarroll lab BICAN manuscript
Software package as nucleus caller for single-nucleus RNA sequencing data. Distinguishes between nuclei and empty droplets by combining summary metrics of cell barcodes—such as total UMI counts, fraction of intronic reads, and percentage of mitochondrial reads. It also incorporates gene expression to learn signatures characteristic of empty droplets.
Provides genomics, proteomics, and bioinformatic services, including next-generation-based genome, microbiome and metagenome sequencing, gene expression and transcriptome analysis, and proteome analysis. CAGEF has established internationally-recognized genomics expertise in the analysis of non-standard species, systems, and environments, with particular experience in microbial, plant, and environmental genomics and metagenomics.
Private university in Chicago, Illinois, United States. Founded in 1972, it is the academic arm of Rush University Medical Center.
Core that provides magnetic resonance imaging (MRI) services and image analysis. Facility contains 3 Tesla Siemens Prisma MRI scanner, variety of head and body receive coils (including 64-channel head coil), and extensive list of pulse sequences and packages providing advanced, accelerated whole-body imaging capabilities. Houses Nordic Neuro Lab hardware and software for functional MRI stimulus delivery, collecting subject feedback, and eye tracking.
Code to support closed-loop control of cutaneous optical stimulation in freely behaving mice, enabling controlled somatosensory input during movement in naturalistic settings.
Contract Research, Development, and Manufacturing Organization (CRDMO) supporting the life sciences industry. Founded in 2004, it provides comprehensive services for small molecules, biologics, and cell and gene therapies (CGT) from discovery to commercialization. Offers integrated R&D, laboratory services, and manufacturing.
Software package provides implementation of the inference pipeline of AlphaFold 3.
Software simulation and documentation package for DNA assembly strategies using Python.
https://matkp.org/ - this is related to cfde - make sure it is linked. From the webinar; ask Ko-Wei if there are questions about this resource. Maybe also link the webinar here
Open community portal for multi-species mammalian adipose biology. Aggregates data for adipose tissues and cell types, genes active within them, and their relationship to human phenotypes. Plans to offer reproducible analysis pipelines, wet lab and computational protocols, datasets, analyses, and visualizations for epigenomic, transcriptomic, proteomic, metabolomic, and imaging data. Designed to aggregate and harmonize multi-species (human and mouse) transcriptomic, genetic, and epigenomic data. Enables to explore adipose biology, cell-type-specific gene expression, and metabolic disease mechanisms through interactive tools like Single Cell Browsers.
Web application to plan and document cloning and genome engineering. Open source and open access tool, FAIR data principles compatible, designed to simulate and/or document genetic manipulation processes used in every day synthetic biology and molecular biology.
BiOptic Qsep400 is high-throughput, 4-channel automated capillary gel electrophoresis system designed for fast, accurate size and concentration analysis of DNA, RNA, and protein samples. It acts as a rapid quality control tool for NGS libraries, PCR fragments, and antibody purity in high-volume research and clinical labs.