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Showing 20 out of 28,805 Resources on page 351

University of Puerto Rico Caribbean Primate Research Center

Facilitates supply of conventional and specific pathogen free nonhuman primates and biological samples. Priority is given to NIH-funded investigators in universities, NIH Intramural Program, and contractors working on behalf of researchers conducting experiments under NIH-funded programs. Non-NIH-funded investigators may still be considered depending on resource availability.To request for CPRC animals, authorized representative of institution will need to submit Animal Allocation Request form.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Edyta Vieth

GeoMapApp

Web tool as map based application for browsing, visualizing and analyzing diverse suite of curated global and regional geoscience data sets. These cover geophysics, geology, geochemistry, physical oceanography, climatology, and more. Runs with Java under Windows, Mac OS X, Linux and Unix/Solaris operating systems.


SciStat

Software tool for statistical analyses on any device that has web browser and connection to internet.


CNVkit

Software command line toolkit and Python library for detecting copy number variants and alterations genome wide from hight hroughput sequencing.


endoR

Software R package to interpret fitted tree ensemble model.Used to extract and visualize how predictive variables contribute to tree ensemble model accuracy.

  • Resource
  • dkNET
  • 5 years ago - submitted by Ko-Wei Lin

HOBOware Pro

Weather data logging software used for all HOBO data loggers and wireless data nodes. Used to read out and plot data, and export to spreadsheets for further analysis.


City University of New York Advanced Science Research Center Epigenetics Core Facility

Facility at Advanced Science Research Center of City University of New York provides research resources and services that include nucleic acid extraction and fragmentation, quantitative gene expression analysis, targeted DNA methylation analysis in specific genomic loci of interest, next generation sequencing RNA-seq and ChIP-seq, and single cell genomics.Provides advanced cell sorter with biosafety protection for flow cytometry service, services for RNAScope to allow for in situ hybridization detection of transcriptional targets with spatial resolution.

  • Resource
  • SciCrunch
  • 5 years ago - submitted by Edyta Vieth

OpenEpi

Web based, open source, operating system independent series of programs designed for use in public health and medicine for training or practice that provide number of epidemiologic and statistical tools for summary data. Developed in JavaScript and HTML, and can be run in modern web browsers. Program can be run from OpenEpi website or downloaded and run without web connection.


Creative Biogene

Company provides mitochondrial research products. Has team of scientists and is equipped with variety of high end instruments to create comprehensive mitochondrial research service platform. Provides customers with customized mitochondrial research services.

  • Resource
  • SciCrunch
  • 5 years ago - submitted by Joe Cohen

Cytena: CELLCYTE X

Live cell imaging system. Includes CELLCYTE Studio software.


qPCRsoft

Real Time PCR control and evaluation software, provides intuitive controls and automated evaluation. Part of Analytik Jena qTOWER3 system. Providies threshold calculation for determination of Ct values, standard curves, PCR efficiencies, and advanced evaluation methods.


Princeton Handbook for Reproducible Neuroimaging

Handbook provides reference for best practices in reproducible fMRI research.Many elements of handbook are specific to Princeton Neuroscience Institute computing infrastructure, but principles are widely applicable.

  • Resource
  • dkNET
  • 5 years ago - submitted by Maryann Martone

Turing Way handbook for reproducible data science

Guide to reproducible data science to support students and academics as they develop their code, with aim of helping them produce work that will be regarded as gold standard examples of trustworthy and reusable research. Include training material on version control, analysis testing and open and transparent communication with future users.

  • Resource
  • dkNET
  • 5 years ago - submitted by Maryann Martone

germline flow

High performance of a GPU-accelerated variant calling tool in genome data analysis.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Fandi Ai

germline flow

High performance of GPU accelerated variant calling tool in genome data analysis.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Fandi Ai

James Madison University

James Madison University is a public research university in Harrisonburg, Virginia. Founded in 1908 as State Normal and Industrial School for Women at Harrisonburg, institution was renamed Madison College in 1938 in honor of President James Madison and then James Madison University in 1977.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Edyta Vieth

James Madison University Light Microscopy and Imaging Core Facility

Core provides instrumentation, resources, training, and consultation. Facility offers access to diverse range of light microscope and imaging systems,image analysis software and solutions, practical and theoretical training for faculty, students and classes,consultation on data acquisition, analysis, and presentation.

  • Resource
  • SciCrunch
  • 5 years ago - submitted by Edyta Vieth

Motif Alteration Genome wide to Globally Investigate Elements

Software Python package for identifying motifs mediating transcription factor binding and function. Links mutations of motif to changes of epigenomic feature without assuming linear relationship.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Zeyang Shen

Motif Mutation Analysis for Regulatory Genomic Elements

Software package that integrates genome wide genetic variation with epigenetic data to identify collaborative transcription factor pairs. Optimized to work with chromatin accessibility assays such as ATAC-seq or DNase I hypersensitivity, as well as transcription factor binding data collected by ChIP-seq. Used to identify combinations of cell type specific transcription factors while simultaneously interpreting functional effects of non-coding genetic variation.


Thermo Fisher: Applied Biosystems: 3500/3500xL Genetic Analyzer System

System includes fluorescence based DNA analysis instrument using capillary electrophoresis technology with 8 or 24 capillaries, computer workstation and monitor, and integrated 3500 Series Data Collection Software 3.1 for instrument control, data collection, quality control, base calling, and size calling of samples.