Curator Dashboard

Interface to H2O4GPU, collection of GPU solvers for machine learning algorithms.

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• RRID
• 4 years ago - submitted by Muhammad Farooq

Software R package for mixed models with single variance component besides residual error, which allows for efficient prediction with unreplicated training data. Makes ridge regression and other kernel methods accessible to plant breeders interested in genomic selection.

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• RRID
• 4 years ago - submitted by Muhammad Farooq

Web tool as protein docking server, based on rigid body docking programs ZDOCK and M-ZDOCK, to predict structures of protein-protein complexes and symmetric multimers.

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• RRID
• 4 years ago - by Anonymous

Web tool to predict and analyze exonic splicing silencers.

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• RRID
• 4 years ago - by Anonymous

Software framework for modeling sequence motifs based on maximum entropy principle.

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• RRID
• 4 years ago - by Anonymous

Software library to automatically reject bad trials and repair bad sensors in magneto/electroencephalography data.

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• RRID
• 4 years ago - by Anonymous

Software tool for integration of spatial information in spatial transcriptomics data clustering.

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• SciCrunch
• 4 years ago - submitted by Simone Avesani

Software to calculate p-distance matrix based Variant Call Format.

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• RRID
• 4 years ago - by Anonymous

Software is post processing, data integrity software for quantitative protein expression analysis including In-Cell Western Assays, Western blots, membranes, slides, and gels.

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• RRID
• 4 years ago - by Anonymous

Bonsai code for running GOFish platform for behavioural experiments in fish.

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• RRID
• 4 years ago - submitted by Kevin Chavez Lopez

System includes Odyssey XF Imager and Empiria Studio Software for streamlined image acquisition, organization, and analysis of Western blots. Used for imaging near infrared and enhanced chemiluminescent Western blots, to detect multiple targets on same blot with two channel multiplex fluorescence, and document DNA gels.

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• RRID
• 4 years ago - by Anonymous

Software tool for linkage disequilibrium decay analysis based on variant call format files.

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• RRID
• 4 years ago - by Anonymous

Project related to tracking behavior. Used to identify subgroups of individuals that differentially attribute incentive value to food cue. Includes apparatus for studying Pavlovian conditioned approach behavior. Customized rat PavCA chambers are constructed based on modular devices purchased from Med-Associates. Code used to operate equipment and collect data was written using Med-Associates’ MEDSTATE programming language. This program is then loaded into Med-PC V operating program, also created by Med-Associates.

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• RRID
• 4 years ago - submitted by Jensen Palmer

Software platform and infrastructure that aggregates, integrates, and analyzes human genetic and genomic data to spark insights into complex diseases. Data and software platform for storing, processing, and presenting genetic and genomic data.

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• dkNET
• 4 years ago - submitted by Ko-Wei Lin

Software for data processing and analysis, automated reporting and data management, data normalisation, generation of dose response curves, generation of IC50. Captures data from all assays, regardless of therapeutic modality or area.

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• RRID
• 4 years ago - by Anonymous

Software package includes comprehensive tools to provide full range of analysis for applications including chemiluminescence, chemifluorescence, fluorescence, colorimetric imaging and colony counting.

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• RRID
• 4 years ago - by Anonymous

Web server for whole genome comparison and annotation of orthologous clusters across multiple species.Works on any operating system with modern browser and Javascript enabled. Used to identify orthologous gene clusters and supports user define species to upload customized protein sequences. Interactive graphic tool which provides Venn diagram view for comparing multiple species protein sequences.

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• RRID
• 4 years ago - by Anonymous

Software package for comprehensive benchmarking study of survival analysis methods using both omics data and clinical data. Evaluates diverse collection of survival models for both clinical and omics datasets.

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• SciCrunch
• 4 years ago - by Anonymous

Provides access to technologies and services for study of genomics and epigenomics of cancer, in addition to providing technical expertise for project design, trouble shooting and pre and post award support. Services include next generation sequencing, single cell genomics, spatial genomics, gene expression assays and molecular quantitation, services for sample extraction and QC.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides researchers with sophisticated methods for analysis and preparative sorting of both normal and tumor cells. Helps researchers to measure parameters including apoptosis, gene expression, drug metabolism, immune responses and pathways of cellular activation, both normal and tumor related. Provides access to high parameter cytometry instrumentation including spectral cytometry, mass cytometry and imaging mass cytometry.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth