Curator Dashboard

Web server for cancer miRNome interactive analysis and visualization based on human miRNome data of cancer types from The Cancer Genome Atlas, and public cancer circulating miRNome profiling datasets from NCBI Gene Expression Omnibus and ArrayExpress. Comprehensive database for interactive analysis and visualization of miRNA expression profiles.

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• RRID-Legacy
• 4 years ago - by Anonymous

Software pipeline to improve gene annotation for cross species analysis of single cell RNA-Seq. Cross-species transfer of high quality 3’UTR annotation for single cell RNA-Seq.

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• SciCrunch
• 4 years ago - submitted by Holger Klein

Software tool for searching metabolites in different databases including Kegg, HMDB, LipidMaps, Metlin, NP Atlas, KNApSAcK, MINE and in house library. Designed for searches through experimental masses obtained from mass spectrometry techniques. Metabolite annotation tool that uses expert system to score putative annotation based on analytical information acquired under different configurations.

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• RRID-Legacy
• 4 years ago - by Anonymous

Facility equipped with instruments for optical and electron microscopy, and Flow Cytometry.Offers experimental design, equipment training, staff operated image acquisition, and image analysis. All users must be trained by Facility staff to access the equipment.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Creative Biogene provides range of services and products to assist researchers in cardiac disease related mitochondria studies. Offers comprehensive testing services for evaluation of variety of cardiac diseases. Mitochondria focused testings and services with advantage of animal based models.

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• SciCrunch
• 4 years ago - submitted by Joe Cohen

Creative Biogene provides comprehensive range of services and products to assist researchers in cancer related mitochondria studies. Offers tests and services with advantage of cell based and animal based models.

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• SciCrunch
• 4 years ago - submitted by Joe Cohen

Creative Biogene works with you to validate and explore pathogenesis of mitochondria associated syndromes and possible interventions, with professional services and products to support your research. Provides rapid mitochondrial function testing services, allowing clients to accurately analyze relationship between disease and mitochondria.

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• SciCrunch
• 4 years ago - submitted by Joe Cohen

Creative Biogene provides comprehensive range of services and products to assist researchers in mitochondrial assays and studies. Service to validate and explore pathogenesis of mitochondria associated diseases and possible interventions.

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• SciCrunch
• 4 years ago - submitted by Joe Cohen

Web portal related to Zika virus, including metadata collection for academic publications on the topic, structured data ontology of terms, and integrated resources in the Wikidata platform.

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• SciCrunch
• 4 years ago - submitted by Lane Rasberry

Software toolkit incorporating gamma series methods and sliding window strategies. Used for calculating nonsynonymous (Ka) and synonymous (Ks) substitution rates for evaluating sequence variations for protein orthologs across different species or taxonomical lineages with unknown evolutionary status.

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• RRID-Legacy
• 4 years ago - submitted by Fan Jiang

Software toolkit for detection and evolutionary analysis of gene synteny and collinearity.

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• RRID-Legacy
• 4 years ago - submitted by Fan Jiang

Software phylogenetic tree inference tool which uses maximum likelihood optimality criterion. Used for maximum likelihood phylogenetic inference. Offers improved accuracy, flexibility, speed, scalability, and usability compared with RAxML/ExaML.

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• RRID-Legacy
• 4 years ago - submitted by Fan Jiang

Software tool to locate and display tandem repeats in DNA sequences. Used to analyze DNA sequences.

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• RRID-Legacy
• 4 years ago - submitted by Fan Jiang

Software tool for classification of transposable elements by convolutional neural networks. Preprocesses and transforms one dimensional sequences into two dimensional space data, image like data of sequences, and apply it to deep convolutional neural networks.

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• RRID-Legacy
• 4 years ago - submitted by Fan Jiang

Software package to filter out false discoveries in raw TE candidates and generate high quality non redundant TE library for whole genome TE annotations.Produces filtered non redundant TE library for annotation of structurally intact and fragmented elements.

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• RRID-Legacy
• 4 years ago - submitted by Fan Jiang

Software python package simplifies training fast and accurate neural nets using modern best practices.

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• RRID-Legacy
• 4 years ago - submitted by Nico Riedel

Web tool for detecting and characterising biosynthetic gene clusters in bacteria and fungi. AntiSMASH 6 increases number of supported cluster types from 58 to 71, displays modular structure of multi modular BGCs, adds new BGC comparison algorithm, allows for integration of results from other prediction tools, and detects tailoring enzymes in RiPP clusters.

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• RRID-Legacy
• 4 years ago - by Anonymous

Web server for prokaryotic species circumscription based on pairwise genome comparison. Service for in silico calculating extent of identity between two genomes, parameter routinely used in process of polyphasic microbial species circumscription. Service measures average nucleotide identity.

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• RRID-Legacy
• 4 years ago - by Anonymous

Web server of multi draft based scaffolder.Exploits information obtained from set of genomes from related organisms to determine correct order and orientation of contigs.

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• RRID-Legacy
• 4 years ago - by Anonymous

Vertical pipette puller to create microelectrodes from borosilicate capillaries.

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• RRID-Legacy
• 4 years ago - by Anonymous