Curator Dashboard

Software package for detection and handling of doublets/multiplets in single cell sequencing data.

• Resource
• RRID
• 4 years ago - by Anonymous

Public croatian university and the oldest continuously operating university in the area covering Central Europe south of Vienna and all of Southeastern Europe.

• Resource
• RRID
• 4 years ago - by Anonymous

Cross platform software for advanced meta analysis.

• Resource
• RRID
• 4 years ago - submitted by Kalyana Pentapati

Software tool as flexible, probablistic metrics for quality control of scRNA-seq data. Adaptive probabilistic framework for quality control of single-cell RNA-sequencing data. Data driven QC metric that jointly models proportion of reads mapping to mtDNA and number of detected genes with mixture models in probabilistic framework to predict which cells are low quality in given dataset.

• Resource
• RRID
• 4 years ago - by Anonymous

Provides support for design, execution, and analysis of experiments involving Next Generation Sequencing through access and use of Illumina HiSeq 1500. Sequencer performs wide range of analysis including target preparation for RNAseq, Exome Seq, ChIP seq, Methyl Seq, whole genome sequencing, and small RNA sequencing.Core is involved in all aspects of Nanopore sequencing.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Open source, docker based, and GPU enabled jupyterlab notebook infrastructure that runs on public compute infrastructure of Galaxy Europe for rapid prototyping and developing end-to-end AI projects. Jupyterlab notebook in GPU enabled docker container for machine learning and deep learning.

• Resource
• RRID
• 4 years ago - submitted by Anup Kumar

Provides services to anything related to genomic analysis, such as RNAseq, genome sequencing, ATACseq etc, from experiment design all the way down to data analysis.Provides expert services for cell isolation, transcriptome and epigenetic profiling, and de novo genome assembly using next generation sequencing platforms from Illumina.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Web tool for prediction of drug combination effects in cancer using different synergy metrics and ensemble learning. Allows user to input two drugs, in form of two distinct SMILE files and attain prediction of their synergistic effects on specific cancer cell lines.

• Resource
• SciCrunch
• 4 years ago - by Anonymous

Image analysis software for florescence microscopy.

• Resource
• RRID
• 4 years ago - by Anonymous

Offers services to researchers looking for collaborators or contractors for their educational or training projects.Offers development tools and hosting services to educators creating their own online training resources.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides range of instrumentation and expertise for cell sorting and analysis that can support experimental needs related to single cells, cell line production, biosensor development, and dye analysis. Offers expertise in flow cytometry experimental design, operation of instruments, distribution of raw data and sort reports, interpretation of results, and preparation of graphics for presentation and publication.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Facility housed in purpose built imaging suites in Papadakis Integrated Sciences Building and in Bossone Research Center. Serves light microscopy needs of Drexel researchers and supports teaching missions of Biology and Biomedical Engineering curricula and provides service to users from local biotech companies.Provides facility, expertise, and education in advanced quantitative light microscopy.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides support for students, postdoctoral fellows, and faculty interested in the use of computational approaches to solving biological problems. Our goal is to lower as much as possible the threshold to enter the -omics area of the life sciences.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides Purdue researchers access to electron microscopy instrumentation including scanning electron microscopes, small dual beams and transmission electron microscopes. Expert staff scientists help with training and project support.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Structural equation modeling software helping support your research and theories by extending standard multivariate analysis methods, including regression, factor analysis, correlation and analysis of variance.

• Resource
• RRID
• 4 years ago - by Anonymous

Core provides cell analysis and sorting services. Instruments include Cytek Aurora, Beckman Coulter CytoFLEX S, Thermo Fisher Attune CytPix, SONY MA900, and BD FACSSymphony S6.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Facility provides technical expertise and instrumentation including nanoscience and engineering, polymer research, biomedical engineering, and chemistry and physics of solid materials.Houses electron microscopes, X-ray diffractometers, X-ray photoelectron spectrometer and suite of sample preparation tools. Staff members provide expert consultation, training and assistance to MCC users. Core is involved in teaching both undergraduate and graduate level courses in Materials Science and Engineering, Mechanical Engineering and Mechanics, Biomedical Engineering, and Biology. Trained and certified users are welcome to work independently on our instruments.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Preclinical ultrasound imaging. Provided instruments include Vevo 3100, Vevo 3100 LAZR-X, Perkin Elmer Vega.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Conducts comprehensive analysis of cellular lipids that encompass fatty acyls, glycerolipids, glycerophospholipids, sphingolipids, sterol lipids, and prenol lipids.

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Located in ISEC research center and includes advanced imaging instruments. CILS has three core facilities: Microscopy Core (confocal/multi-photon/lightsheet microscopes), Flow Cytometry Core (cell analyzer/sorter) and Preclinical Imaging Core (3T small animal MRI and ultrasound).

• Resource
• SciCrunch
• 4 years ago - submitted by Edyta Vieth