Curator Dashboard

Software package for managing data in omics research projects. Integrates with iRODS (integrated rules oriented data system) software for mass data management.

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• RRID-Legacy
• 4 years ago - submitted by Manuel Holtgrewe

Software Matlab based toolbox for temporal decomposition of EEG signal. Used for decomposition, reconstruction, and single trial analysis of event related potentials.

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• RRID-Legacy
• 4 years ago - by Anonymous

Software Matlab based MVPA toolbox for EEG and MEG analyses. Classification and regression toolbox for multi dimensional data. Performs cross validation, hyperparameter tuning, and nested preprocessing. Computes various classification and regression metrics and establishes their statistical significance.

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• RRID-Legacy
• 4 years ago - by Anonymous

Software Matlab based MVPA toolbox for EEG analyses. Allows direct comparison of ERP/ERF results to MVPA results using any dataset in standard EEGLAB or Fieldtrip format. Performs and visualizes multiple comparison corrected group decoding and forward encoding results in variety of ways, such as classifier performance across time, temporal generalization (time-by-time) matrices of classifier performance, channel tuning functions (CTFs) and topographical maps of (forward-transformed) classifier weights.

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• RRID-Legacy
• 4 years ago - by Anonymous

Software tool for high throughput processing of MS/MS and MS spectra to provide protein and peptide identifications and relative quantitation.

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• RRID-Legacy
• 4 years ago - by Anonymous

Partnership between Vincent J. Coates Genomics Sequencing Laboratory,Functional Genomics Laboratory, and Computational Genomics Resource Laboratory. Offers consultation on experimental design and data analysis, full suite of technical services related to high throughput sequencing and genomics experiments, and access to high performance computational infrastructure.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides flow cytometry experimental design, data collection, data analysis and cell sorting services; training for flow cytometers, imaging flow cytometer, and data analysis using IDEAS and FlowJo software;staff assisted flow cytometry and imaging flow cytometry data acquisition, cell sorting, and data analysis, experimental design and consultation services. FCF currently has Beckman Coulter Moflo Astrios cell sorter, Luminex/Amnis Image Stream X Mark II, Luminex/Amnis Cell Stream, and Becton Dickinson Accuri C6 flow cytometer. Astrios cell sorter is housed in ClassII BSC and has 3 lasers (405nm, 488nm, 642nm) and 11 detectors and can sort up to 6 populations simultaneously. Image Stream X Mark II is equipped with 20x, 40x, 60x objectives, 4 lasers (405nm, 488nm, 561nm, 642nm), 10 detection channels, EV mode for small particle detection, and an autosampler.Cell Stream is equipped with 3 lasers (405nm, 488nm, 642nm), 13 detection channels, EV mode for small particle detection, and autosampler. Accuri C6 is equipped with 2 lasers (488nm, 642nm), and 4 detection channels.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Core, available through NC State Office of Information Technology, provides entry and intermediate level computing resources and consulting support for research and instruction.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Interdisciplinary data platform provides access to research data and information from all fields of applied plasma physics and plasma medicine. Aims at distributing, publishing and archiving of data and information, supporting findability, accessibility, interoperability and re-use of data, for low temperature plasma physics community.Most of data are freely available and can be used under terms of license listed on dataset description page. Each dataset can be identified, cited and shared by using Digital Object Identifier.

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• RRID-Legacy
• 4 years ago - by Anonymous

Offers Next Generation Sequencing (NGS) and comprehensive data analyses and interpretation for 16S rRNA gene amplicon sequences and other big data sequence applications. Offers analyses of previously obtained sequences. Many investigators are familiar with Human Oral Microbe Identification using Next Generation Sequencing (HOMINGS) as well as its predecessor the Human Oral Microbe Identification Microarray (HOMIM) for rapid 16S rDNA analyses of oral clinical samples. We continue in that tradition using bioinformatic methodology, which will provide the best possible taxa identification.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Core offers consulting and support services for both soft tissue and precise hard tissue analysis. Services include: tissue processing, embedding, sectioning, staining, and guidance on protocols. Can embed samples in standard molds or custom molds in paraffin, resin, or as frozen tissue for routine histology. Provides special stains and immunohistological studies.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Resource provides equipment, training, and operating assistance for cell sorting and analysis. Facility staff oversees equipment maintenance, trains new users, and assists with assay development and operation of equipment.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Validated Antibody Database and Reagents. Platform to search antibodies, siRNA/shRNA, ELISA, cDNA clones, proteins/peptides, assays, and biochemicals.

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• SciCrunch
• 4 years ago - by Anonymous

Data science platform for predicting and designing biological function. Platform to model plant and microbial physiology and community dynamics. Knowledge creation and discovery environment for biologists and bioinformaticians. Integrates variety of data and analysis tools from US Department of Energy and other public services into platform that leverages scalable computing infrastructure and performs systems biology analyses. Enables scientists to analyze their own data within context of public data and share findings across system.

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• dkNET
• 4 years ago - submitted by Ko-Wei Lin

Platform facilitates comprehensive discovery of and access to multidisciplinary microbiome data in order to unlock new possibilities with microbiome data science. Multi organizational effort to integrate microbiome data across diverse areas in medicine, agriculture, bioenergy, and environment. Founded to support long term advancement of microbiome science.

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• dkNET
• 4 years ago - submitted by Ko-Wei Lin

Portal designed for Library and KM Professionals to locate internet resources related to their profession. Not for profit service to knowledge resources. Platform with links to e-resources on Knowledge Management, Librarianship, Philosophy, Health, Technology, ITES/BPO/ ITIL, Call Centers, Business Information etc.

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• SciCrunch
• 4 years ago - by Anonymous

Open source LC-MS data processing engine for simplifying metabolomics analysis. Mass spectrometry data processing engine that is optimal for isotopomer labeling and global metabolomic profiling experiments. Interactive software platform that accelerates analysis of LC-MS, GC-MS, and LC-MS/MS datasets.

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• RRID-Legacy
• 4 years ago - by Anonymous

Software R package for cell type deconvolution of heterogeneous tissues based on bulk RNAseq data or single cell RNAseq expression profiles.Provides unified testing interface to rapidly run and benchmark multiple deconvolution methods.

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• RRID-Legacy
• 4 years ago - by Anonymous

LAR provides care for laboratory animals in support of Colorado State University research community. Oversees care and management of animals in animal holding space facility for small and large animals including animal biosafety level 3.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Web tool for calculations for Mendelian Randomization. Power calculations for Mendelian Randomization. Used to calculate statistical power for Mendelian Randomization study, using Non Centrality Parameter based approach.

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• SciCrunch
• 4 years ago - by Anonymous