Curator Dashboard

Core for conventional brightfield microscopy and confocal microscopy.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Software R package to calculate various chance-corrected agreement coefficients among 2 or more raters. Among CAC coefficients covered are Cohen's kappa, Conger's kappa, Fleiss' kappa, Brennan-Prediger coefficient, Gwet's AC1/AC2 coefficients, and Krippendorff's alpha. Multiple sets of weights are proposed for computing weighted analyses.

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• RRID
• 4 years ago - by Anonymous

Software R package to calculate various intraclass correlation coefficients. Used to quantify inter-rater and intra-rater reliability.

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• RRID
• 4 years ago - by Anonymous

Software for creating surveys and questionnaires.

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• RRID
• 4 years ago - by Anonymous

The openMINDS metadata framework comprises: schema specifications for multiple, interlocked metadata models for Linked Data, instance libraries for serviceable, well defined terms and constructs, as well as supportive tooling. openMINDS is developed as open source project by Open Metadata Initiative on GitHub. The framework is distributed over multiple, interlinked GitHub projects with one main GitHub repository for central access and maintenance.

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• RRID
• 4 years ago - submitted by Anita Bandrowski

Software tool to compute gene structure predictions.Gene structure predictions are calculated using similarity-based approach where additional cDNA/EST and/or protein sequences are used to predict gene structures via spliced alignments.

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• dkNET
• 4 years ago - by Anonymous

Portal enables browsing, searching, and analysis of human genetic and genomic information linked to musculoskeletal traits and diseases, while protecting the integrity and confidentiality of underlying data.

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• RRID
• 4 years ago - submitted by Maria Costanzo

Portal includes human genetic and functional genomic results generated via consortia based science focusing on neurodegenerative diseases such as ALS, Parkinson's disease, and Alzheimer's disease.

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• RRID
• 4 years ago - submitted by Maria Costanzo

We provide collection of 26481 honey bee (Apis mellifera) fore wing images which represent 1725 samples and 13 countries in Europe: Austria, Croatia, Greece, Moldova, Montenegro, Poland, Portugal, Romania, Serbia, Slovenia, Spain, Turkey. The data contain wing images, raw coordinates of 19 landmarks and geographic coordinates of locations from which samples were collected.

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• RRID
• 4 years ago - submitted by Adam Tofilski

Comparative database with clinical and resource utilization data for inpatient, ambulatory surgery, emergency department and observation unit encounters for more than 49 children's hospitals.

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• RRID
• 4 years ago - by Anonymous

Second generation low noise 16 bit computer interface from Instrutech Corporation. 16-bit Multi-Channel Data Acquisition Interface with PCI or USB host adapter.

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• RRID
• 4 years ago - submitted by Esteban Suarez Delgado

Scientific camera with EMCCD image sensor that is capable of detecting single photon events without image intensifier, achievable by way of unique electron multiplying structure built into the chip.

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• RRID
• 4 years ago - submitted by Esteban Suarez Delgado

Luca-S camera of single photon sensitive imaging Andor family scientific cameras with Electron Multiplying Charge Coupled Device detector, designed for most challenging low-light imaging applications.

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• RRID
• 4 years ago - submitted by Esteban Suarez Delgado

Second generation low noise 16 bit computer interface from Instrutech Corporation. 16-bit Multi-Channel Data Acquisition Interface with PCI or USB host adapter.

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• RRID
• 4 years ago - submitted by Esteban Suarez Delgado

150 mm focal length monochromator/spectrograph. It features astigmatism corrected optical system, dual indexable gratings and interchangeable grating turrets.

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• RRID
• 4 years ago - submitted by Esteban Suarez Delgado

EMCCD camera. Facilitated by a fundamental redesign, the iXon Ultra platform takes the popular back-illuminated 512 x 512 frame transfer sensor and overclocks readout to 17 MHz, pushing speed performance to an outstanding 56 fps (full frame), while maintaining quantitative stability throughout. Ultimate Sensitivity is attained through deep thermoelectric cooling down to -100°C and industry-lowest clock-induced charge noise. Rejected; waiting for the submitter letter.

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• RRID
• 4 years ago - submitted by Esteban Suarez Delgado

TE2000 was developed as full system with 3 models, the S, the U and the E. TE2000E is high precision Z-focus automated model that features 5 output ports and 5-way motorized light path changer. Used for advanced research that requires image capture in 3D, including confocal microscopy and deconvolution processing.TE2000U is universal model that comes with 4 output ports as standard, plus optional fifth user defined position, thereby providing unprecedented 5-way light path.The U model also features integrated magnification changer module providing 1x or 1.5x magnification to all ports.

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• RRID
• 4 years ago - submitted by Esteban Suarez Delgado

THIS TEST is a

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• NIF
• 4 years ago - by Anonymous

Web based transcription factor enrichment analysis. Web server ranks TFs associated with user-submitted gene sets. ChEA3 background database contains collection of gene set libraries generated from multiple sources including TF-gene co-expression from RNA-seq studies, TF-target associations from ChIP-seq experiments, and TF-gene co-occurrence computed from crowd-submitted gene lists. Enrichment results from these distinct sources are integrated to generate composite rank that improves prediction of correct upstream TF compared to ranks produced by individual libraries.

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• RRID
• 4 years ago - by Anonymous

Software tool as R implementation of NicheNet method to predict active ligand-target links between interacting cells. NicheNet uses human or mouse gene expression data of interacting cells as input and combines this with prior model that integrates existing knowledge on ligand-to-target signaling paths. This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest.

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• RRID
• 4 years ago - by Anonymous