Curator Dashboard

Software data management pipeline for camera synchronization and combined data directories.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

3D printed microdrive for electrophysiology and optophysiology. Consists of main body and head. Used for in vivo tetrode recording, optical imaging, and optogenetic manipulation in freely moving mice.Design files and build instructions for this device can be found on TetrODrive GitHub.Microdrive can be assembled in 15 min and price for all materials, including 3D printer, is lower than single commercial microdrive.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Open source video recording system for acquiring video data that is scalable, flexible, and affordable.Utilizes Raspberry Pi (RPi) miniature computer and 8-megapixel Camera Board that allows for greater manipulation of recording parameters. System may be accessed on GitHub.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Core provides cytometry services for analysis and sorting of cells as well as expert consultation for experimental design and planning. Offers access to several analytical flow cytometers as well as high speed cell sorting. Training and technical expertise is available.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Facility is equipped with cell sorters, analyzers, ImageStream and full spectrum flow cytometer. Staff provides training and maintenance.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides software tool to explore, download and apply statistical models on aggregated data collected for Fox Insight online clinical study. Study collects patient reported outcomes and genetic data from people with Parkinson's disease and their loved ones.

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• dkNET
• 4 years ago - submitted by Maryann Martone

Software tool to manipulate reconstructions of geological and paleogeographic features through geological time. Interactively visualize vector, raster and volume data. Desktop software for interactive visualisation of plate tectonics.

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• RRID-Legacy
• 4 years ago - by Anonymous

Software pipeline to estimate and predict genomic resolution of Hi-C libraries. Used for estimating and predicting HiC library resolution.

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• RRID
• 4 years ago - by Anonymous

Software python script to generate Martini protein topology and structure files based on atomistic structure file. Used to convert (atomistic) protein structures to Martini coarse grain structures and topologies. Replaces old seq2itp, atom2cg and ElNeDyn scripts.

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• RRID
• 4 years ago - by Anonymous

Software tool for generating custom membranes for molecular simulations. Software Python script to setup Martini bilayer systems.

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• RRID
• 4 years ago - by Anonymous

Public research university in Aberdeen, Scotland.

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• RRID
• 4 years ago - submitted by Edyta Vieth

Provides services and expertise in flow cytometry to government agencies, industry, educational and private individuals.

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• SciCrunch
• 4 years ago - by Anonymous

Single cell transcriptomic atlas of multiple organs from individual human donors. Multiple organ, single cell transcriptomic atlas of humans. Molecular reference atlas for cell types of human body. Provides molecular definition of these cell types and reveals many other aspects of human biology, including how same gene can be spliced differently in different cell types, how shared cell types in different tissues can have subtle differences in their identities, and how clones of immune system can be shared across tissues.

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• dkNET
• 4 years ago - submitted by Ko-Wei Lin

Provides advanced flow cytometric and morphology services at cellular and subcellular levels of resolution.Services include investigator access to equipment, education and consultation, comprehensive sample processing, data acquisition and data analysis, luminex cytokine, chemokine and growth factor quantification, and core flow cytometry services for investigator and biotech sponsored clinical trials.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides access to light microscopy, photo-patterning, and light-assisted 3D printing techniques to help researchers in science, engineering and life sciences as well as our industrial partners achieve their scientific goals.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Offers instruments and services to support research in microscopy.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides services in disciplines of genomics, microbiology and immunology. We engage in collaborative projects that benefit from close interactions with veterinarians and human clinicians alike.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Light and fluorescence microscopy core facility with focus on applications in infectious disease, pathogen and human health research.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Facility provides expert staff for training, services, and cell culturing space for HT automated cell seeding, liquid handling equipment, multi label plate reader and high content automated confocal imaging for any type of multi well, multi conditional mammalian cell experiments.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Offers access to several scientific instruments intended to answer structural biological questions for scientific community.Consists of high field nuclear magnetic resonance spectrometers (500 MHz, 600 MHz with cryo-probe and 700 MHz) controlled with recent NEO consoles from Bruker, small angle X-rays scattering (SAXS) instrument, with high throughput robotics. SAXS can be coupled to liquid chromatography system for SEC-SAXS applications.Other instruments include size exclusion chromatography system coupled to multi angle light scattering detector (SEC-MALS), isothermal titration calorimetry (ITC) instrument as well as several liquid handling robots for rapid bio molecular crystal preparation and screening. Users have also access to bio-informatics room with several Linux computers for data analysis.Personnel is available and will teach and support users on instruments, research consultation and turn key services are also available upon request.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth