Curator Dashboard

Software qualitative analysis tool. Used by researchers and practitioners to uncover and systematically analyze complex phenomena hidden in unstructured data including text, multimedia, geospatial. Provides tools that let the user locate, code, and annotate findings in primary data material, to weigh and evaluate their importance, and to visualize relations between them. Consolidates documents and keeps track of all notes, annotations, codes and memos in all fields that require close study and analysis of primary material consisting of text, images, audio, video, and geo data. Provides analytical and visualization tools designed to open new interpretative views on material.

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• RRID
• 4 years ago - by Anonymous

Software platform to provide programmatic access to experimentally determined and theoretical protein structures. Provides unified programmatic access to experimentally determined and predicted structure models. Used for open collaboration between providers of macromolecular structure models to provide model coordinates and meta information from all contributing data resources in standardised data format, on unified platform.3D Beacons API retrieves and combines data from member data providers, and returns data in JSON format according to 3D-Beacons API specification.

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• SciCrunch
• 4 years ago - submitted by Mihaly Varadi

Software tool to reduce scoring time and simplify data analysis. Offers automated power analysis, semi-automated scoring methods, and advanced tabular and graphical analysis for investigating sleep data sets. Custom scoring and analysis are also available. Scoring sessions between two or more users can be compared. All EEG/EMG and video data sets recorded with Pinnacle software, as well as third party EDF files, can be imported.

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• 4 years ago - by Anonymous

SOCR designs, validates and freely disseminates knowledge. The Resource develops AI/ML tools, mathematical models, and end-to-end data analytic protocols for biomedical and health studies. It provides portable online aids for probability, statistics and health science education, promotes technology enhanced instruction, supports efficient statistical computing, supports AI-services, and advances predictive big data analytics. The SOCR platform includes repository of interactive apps, datasets and case-studies, computational tools, visualization approaches, instructional resources, learning materials, and curricular components. SOCR faculty, staff, and students support data and information science collaborations and analytic partnerships involving biomedical, healthcare, and biostatistical investigations.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Data is the Total population of species collected in litter strata and 0-20 cm soil depth in the municipalities of Posoltega and Leon, Nicaragua. The data is used to identify The diversity and richness of the species using the following indices reported by the authors (Moreno, 2001; Rousseaua, Deheuvelsb, Rodriguez-Arias, & Somarriba, 2012; Zerbino, 2005): Richness (number of species): The number of species was determined for each farm and the total for each sampled system. Relative abundance (Density number of individuals 1 m² for each species): The total number of individuals for each species present in each sampling unit and farms was counted. the Past 4.03 program DAFGA (RRID:SCR_003319) was used. Functional Groups (Density number of individuals 1 m² for each species): He counted the number of individuals and the richness of species present in the three main functional groups that are: Herbivores, Predators and Detritivores.

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• SciCrunch
• 4 years ago - submitted by Carlos Alberto Zuniga Gonzalez

Data is the Total population of species collected in litter strata and 0-20 cm soil depth in the municipalities of Posoltega and Leon, Nicaragua. The data is used for identify The diversity and richness of the species using the following indices reported by the authors (Moreno, 2001; Rousseaua, Deheuvelsb, Rodriguez-Arias, & Somarriba, 2012; Zerbino, 2005): Richness (number of species): The number of species was determined for each farm and the total for each sampled system. Relative abundance (Density number of individuals 1 m² for each species): The total number of individuals for each species present in each sampling unit and farms was counted. the Past 4.03 program DAFGA (RRID:SCR_003319) was used. Functional Groups (Density number of individuals 1 m² for each species): He counted the number of individuals and the richness of species present in the three main functional groups that are: Herbivores, Predators and Detritivores.

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• SciCrunch
• 4 years ago - submitted by Carlos Alberto Zuniga Gonzalez

Provides genetically modified animal models for our collaborators. For preexisting models provides rederivation or reconstitution for purpose of importing animals into Vivarium barrier. In the absence of preexisting models core works closely with partnering labs to generate their ideal mutation de novo, often using CRISPR technology. Usually beginning with a brief consultation, this process involves discussing factors such as ideal background strain, molecular methods for optimizing the intended genetic change, mutation induction strategies, screening approaches and eventual QC of the new mutant line with the overall goal of giving our collaborators a fully informed, realistic picture of their projects timeframe, pitfalls and workflow. Core provides mouse sperm and embryo cryopreservation services for purpose of archiving and distributing valuable lines. Institute is an AAALAC-accredited facility. All procedures are conducted according to the NIH Guide for the Care and Use of Laboratory Animals.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides services including Next Generation Sequencing, single cell Genomics, and Spatial Transcriptomics facility. Provides experimental design support, library generation, and Illumina and Nanopore Sequencing.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Pathology and Biorepository Core (PBC) integrates anatomic pathology expertise with biorepository and biospecimen science. It provides emphasis on high-quality biospecimens and interpretable results to validate experimental models and extend them to clinical samples. The PBC offers a comprehensive range of biospecimen services, including histology, pathology, and biospecimen processing and storage.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

The database describes the individuals found in 8 farms in western Nicaragua. This database is to identify the Diversity of Functional Edaphic Macrofauna in Musa acuminata x Musa balbisiana (AAB) Agroecosystems.

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• SciCrunch
• 4 years ago - by Anonymous

Software Python package presents interface to use isocortical streamlines of Allen Mouse Common Coordinate Framework. Used to support projection of Allen Common Coordinate Framework mouse brain volumetric data and coordinate data on to 2D representations.

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• 4 years ago - submitted by Anita Bandrowski

Provides platform for quantitative targeted metabolic profiling by MS/MS and GC/MS, supported by library of stable isotope labeled standards as well as extensive scientific expertise to help researchers navigate core resources and use of services.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Core to leverage data, patient populations and investigators at each NCDRC institution, including accessing expertise and resources of regional Clinical and Translational Science Institute hubs (Duke, UNC, and Wake Forest). Research navigators in ACSMC provides input and navigation of clinical research resources available to diabetes investigators based on extensive experience in diabetes specific studies and methodology and deep knowledge of NCDRC resources available at each institution.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides resources and expertise in genomics and mass spectrometry at Wake Forest Center for Precision Medicine. Provides unique access to instrumentation and analytical expertise to NCDRC faculty in support of advancement of diabetes research.Overlooks the use of existing resources at NCDRC partner institutions (UNC, NC A&T, and Duke University) to coordinate work and data analysis with Metabolomics Core to provide omics analyses.Offers analytic services, expertise, and tools to integrate data to better understand interactive systems at play in disease processes.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides diabetes researchers at University of Colorado with access to microscopy and mass cytometry systems. Provides expertise and training to use equipment effectively for diabetes related tissues; expertise and validated diabetes related resources to prepare samples appropriately; guidance to design experiments; resources to analyze data; assistance with data interpretation.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Provides diabetes researchers with access to novel human stem cell-derived in vitro cell models for investigating cellular and molecular features of both Type 1 and Type 2 diabetes. Recent progress in stem cell, organoid culture, gene editing and directed differentiation technologies has afforded opportunities to develop pre-clinical human models.Provides expertise, infrastructure and access to novel human model systems and technologies to DRC investigators. Provides expertise, resources and training in stem cell technologies together with quality control testing, validation standardization and authentication all model platforms and reagents.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Core facilitates access and usage of tissues and services to meet specialized needs of diabetes research community to expedite and catalyze innovative diabetes research at UC AMC. Provides resources to assist DRC investigators with acquisition and processing of rodent and human tissue, and specialized cell lines that are broadly required for diabetes research.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Core leverages current clinical research facilities and equipment available at Barbara Davis Center for Childhood Diabetes, UC AMC Clinical Translational Research Center, University of Colorado Hospital, Denver Veteran Administration Medical Center and Children Hospital Colorado.Core integrates diabetes research across these institutions through communication and distribution of resources available, and creates shared sample and data biobanks and recruiting database of mothers, infants, children, adolescents and adults with diabetes, diabetes risk and controls.

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• SciCrunch
• 4 years ago - submitted by Edyta Vieth

Tissue Slicer with conventional vernier micrometer, resolution 10 micron. Designed to prepare thin slices of living brain, slicing other tissues, blocking fixed tissue for histology, and slicing electrophoretic gels. Sections as thin as 150 microns can be prepared.

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• 4 years ago - by Anonymous

Project consists of suite of 3D-printed tools including superfusion chamber with independent brain presser and animal stand. Modular device that facilitates transfer of pharmacological agents and brain access for electrodes and/or lenses for imaging. Provides stable conditions for electrophysiological and neuroimaging recordings. Device can be print either in-house or through 3d-printing service.

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• RRID
• 4 years ago - submitted by Kevin Chavez Lopez