We support boolean queries, use +,-,<,>,~,* to alter the weighting of terms
Software package as Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis.
Software R package for microbial co-occurrence networks and associated indicator correlation patterns. Microbial ecological network visualization clustering. Used for for microbiome network analysis and modularity‐based multiple network layouts.
Software repository containing the builds for Car, CarData and CarEx.
Provides state-of-the-art, non-invasive neuroimaging, whole body imaging, and spectroscopy technologies for academic and industry-based research in central and western Massachusetts
Wyatt DynaPro NanoStar II is a cuvette-based instrument used to measure the size, molar mass, and concentration of small particles in a liquid solution. Dynamic Light Scattering cuvette-based instrument.
Analytical laboratory instrument used to study chiral (asymmetric) molecules by measuring how they absorb left- and right-handed circularly polarized light. High-throughput and 6-cell capable circular dichroism instrument.
Core supports data-enabled research through training, advising, and collaboration in data science, covering topics like research design, data access, analysis, visualization, reproducibility, ethics, and use of tools and methods in the areas of machine learning, bioinformatics, HPC, and open-source software.
High sensitivity analytical laboratory instrument used to measure the fluorescence and phosphorescence of various chemical and biological samples.Fluorometer with thermal denaturation capabilities.
Cytiva Biacore 8K is an advanced eight-channel surface plasmon resonance (SPR) system used to study molecular interactions in real time without chemical labels.
Isothermal Titration Calorimeter used to measure the heat released or absorbed during biomolecular interactions in solution. Low volume Affinity Isothermal Titration Calorimeter.
Web service to calculate theoretical peptide formula and mass, estimated isoelectric point, net charge, and Kyte–Doolittle GRAVY from a sequence, then convert average molecular weight into laboratory amount and molar concentration. C Suite Biologics is the maintainer of a public browser-based peptide calculation and research-data resource.
Software application that calculates, fits and indices for contrast tuning curves based on Naka-Rushton fits (conventional, exponential, and saturating forms).
Software application that calculates speed tuning index values from spatial and temporal frequency responses. It computes fits to tuning curves derived from stimuli that co-vary in both frequencies.
Software application that calculates spatial and temporal receptive fields from reverse correlations from Hartley stimuli.
Core provides research support in the area of elemental and trace analysis and provides service analyses including Neutron Activation Analysis and inductively-coupled plasma mass spectrometry services. NAA includes Fast neutron activation analysis (FNAA) and Thermal instrumental neutron activation (INAA).
Software Galaxy tools dedicated to metabolomics data (GC, LC or NMR) analysis, available through Galaxy Tool Shed. Collaborative research infrastructure for computational metabolomics. W4M is a virtual research environment built upon the Galaxy web-based platform technology. It enables ergonomic integration, exchange and running of individual modules and workflows. Alternatively, the whole W4M framework and computational tools can be downloaded as a virtual machine for local installation.
Software application that calculates tuning curves for orientation and direction based on vector methods and a double-Gaussian fit.
Auckland Cytometry is a flow cytometry core facility that provides access to technical expertise, training, and access to state-of-the-art instruments for flow cytometry analysis and cell separation.
Software Suite designed to analyze LEGENDplex™ flow cytometry data files. The software suite consists of both an online cloud-based program as well as downloadable desktop applications for both PC and Mac computers.
Software tool for predicting the capsular-type specificity of Klebsiella pneumoniae phage depolymerases from protein sequences. Used for identifying Klebsiella pneumoniae capsule types of phage depolymerases using protein language model-derived protein sequence embeddings.