Curator Dashboard

Alpathwell@ is a digital pathology image analysis software based on artificial intelligence, developed by Servicebio@. It utilizes AI deep learning principles, trains its algorithms using massive amounts of data, and integrates these capabilities into automated image analysis software.

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• 1 week ago - submitted by Guangzhao Pan

Standalone software application developed by Nikon to open, view, and inspect microscopy image files and complex datasets (such as proprietary .nd2 files) without needing a full, paid license of the main NIS-Elements software. Primarily focuses on the export and analysis of images from Nikon confocal microscopes.

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• 1 week ago - submitted by Guangzhao Pan

Web-based journal discovery and comparison resource for researchers. Used to measure the influence, citation performance, visibility, and relative standing of academic and scientific journals. Provides historical submission-to-acceptance statistics from PubMed records where both dates are available, indicative article processing charges to verify with publishers, and OpenAlex-based metrics. Basic journal search, PRISMA and sample-size tools are free; optional AI reports and subscriptions are paid. Historical timelines are not first-decision estimates or guarantees, and OpenAlex metrics are not Clarivate Journal Impact Factors.

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• SciCrunch
• 1 week ago - by Anonymous

LyricsWeb is a music-metadata database and research resource that provides searchable catalogue records and publishes versioned aggregate datasets for reproducible research on song-title structure, originality, reuse, and language-label diversity. Public research releases contain aggregate data and documentation only; they do not redistribute song lyrics, audio, personal data, source code, or item-level proprietary catalogue records.

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• 1 week ago - submitted by Kobi Eliraz

IRCCS Ospedale Policlinico San Martino is a major public university hospital and medical research center located in Genoa, Liguria, Italy.

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• 1 week ago - submitted by Edyta Vieth

Biobank provides high quality and well annotated biospecimen for translational research, encompassing as well the ICLC Biobank (distribution of primary cell lines) and the iCoRE Facility supporting iPSC research by providing a variety of services.

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• 1 week ago - by Anonymous

Web application for concentration and unit conversions from user-supplied mass and volume, with a blend worksheet and shareable or printable calculations. Maintained by PowerfullyPeptides, a commercial research-peptide supplier. Used to perform arithmetic and does not select a human dose or establish suitability for human use.

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• 1 week ago - by Anonymous

Rust and Python software for inferring gene regulatory networks and scoring regulon activity from single-cell RNA-seq and multiome data. Provides GRN inference, AUCell scoring, motif enrichment, scATAC topic modelling, ATAC preprocessing, enhancer linking and eRegulon assembly through a Python API and command-line interface. Includes stage-specific validation and documented output differences from reference pipelines. Used as gene regulatory network inference, motif enrichment and AUCell scoring for single-cell RNA and multiome data. Rust backend, Python API.

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• 1 week ago - by Anonymous

Online survey and research platform built specifically for academic researchers, survey experiments, and data collection. Survey software researchers use for complex branching for survey experiments, advanced randomization, quality checks, and replication file exports, with no custom JavaScript required.

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• 1 week ago - by Anonymous

Community-driven, centralized online repository of online microscopy resources. Searchable database for training and education materials, hardware and software tools, community forums, job postings (including internships, PhDs, and postdocs), and upcoming events like conferences, workshops, and webinars. The goal of MicroscopyDB is to make it easier for everyone to find online information related to microscopy. Contains links to existing online microscopy resources (educational materials, jobs etc.). Coordinated by BioImaging North America (BINA) with pilot funding from a grant awarded via the Chan Zuckerberg Initiative (CZI).

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• 1 week ago - submitted by Anita Bandrowski

Web application for concentration and specified aliquot-volume arithmetic using total material amount and final solution volume. Published by research-materials supplier BioCura Labs, it separates mass from labeled IU activity and provides worked examples, unit validation, shareable results and printable reports without requiring an account.

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• SciCrunch
• 1 week ago - by Anonymous

Software tool to detect and annotate LTR transposable elements in assembled genomes, allowing for their nesting. Structure-based detection of Long Terminal Repeats retrotransposons and their nesting. Used to analyze nested LTR transposable elements in DNA sequences, such as reference genomes.

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• 1 week ago - by Anonymous

Research infrastructure for understanding sleep and mental health in youth.

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• 1 week ago - submitted by Cristal Medeiros

Core offers services to create devices smaller than a human hair, supporting scientific advances in fields ranging from medical diagnostics to environmental sensing to solar energy harvesting. Provides the infrastructure, equipment and staff support necessary to enable to undertake competitive research and development in the growing number of fields that rely on nanofabrication.

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• 1 week ago - submitted by Iulian Codreanu

Service facility offering DNA extraction, qPCR, library preparation, and sequencing services, primarily of environmental DNA (eDNA) samples. The EGCF operates a positive pressure clean room for environmental DNA extractions and PCR preparation to minimize contamination that can occur in traditional laboratory spaces.

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• 1 week ago - by Anonymous

Software tool to estimate cell-type composition in spatial transcriptomics data using single-cell RNA sequencing references. It employs a spatially weighted Poisson-Gamma regression model that incorporates spatial coordinates and neighboring tissue spots to improve cell-type proportion estimates while preserving tissue boundaries. Enables high-resolution mapping and visualization of cell-type distributions across tissue sections.

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• 1 week ago - by Anonymous

Software suite for high-performance analysis of next-generation sequencing data. It supports DNA and RNA sequencing workflows, including sequence alignment, variant calling, somatic mutation detection, and variant quality control. Enables processing of sequencing data from FASTQ files to variant call format (VCF) files while maintaining compatibility with standard bioinformatics workflows.

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• 1 week ago - by Anonymous

Software tool developed by Illumina for detecting and genotyping short tandem repeat expansions from DNA sequencing data. It uses sequence graph-based methods to analyze complex repetitive genomic regions, including imperfect repeats and repeats adjacent to other genetic variants. The software supports targeted genotyping of medically relevant repeat expansion loci and is available for Linux and macOS.

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• 1 week ago - by Anonymous

Software suite of tools for detecting novel expansions of short tandem repeats. Used for analysis of a collection of BAM/CRAM files containing alignments of short (100-200bp) reads.

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• 1 week ago - by Anonymous

Core provides instrumentation and expert support for high-dimensional single-cell and particle analysis. Houses 3-laser BD FACSCanto II (10 parameters) and 4-laser BD FACSymphony A1 (19 parameters). The BD FACSymphony A1 is equipped with a Small Particle Detector capable of resolving particles as small as 100 nm. Offers support throughout the research workflow, including experimental design consultation, multicolor panel building, protocol optimization, high-parameter data acquisition, and data analysis support. Training is available for all instruments. Provides support for grant applications and publications.

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• 1 week ago - submitted by Armelle Le Campion