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Laboratory testing system used by scientists to study animal behavior, learning, and addiction. Also known as a "Skinner box," it features levers, lights, sound generators, and food or water dispensers.
Specialized laboratory enclosure used in behavioral neuroscience to assess exploratory behavior, general locomotor activity, and anxiety-related responses in rodents like mice and rats.
The Axio Observer 7 is an inverted microscope optimized for life science research. The objectives offered are the 5x and 20x air objective, 40x water immersion objective, and the 63x and 100x oil immersion objective. It is suitable for a wide range of applications, from routine brightfield imaging to advanced fluorescence and live-cell experiments.
XY-axis Locomotor Activity Chamber (part of Photobeam Activity System or PAS Open Field) is used to track, measure, and analyze the physical movements and behavior of small laboratory animals like mice and rats.
Laboratory testing tool used to measure anxiety-like behavior in rodents like mice and rats.
Behavioral testing apparatus used to assess anxiety like behavior, evaluate pharmacological agents, and study neurological responses in laboratory rats and mice.
Behavioral testing system used to measure the rewarding or aversive effects of drugs, natural rewards, or stress in laboratory rodents. It relies on two or three distinct compartments with different wall patterns, lights, and floor textures (such as wire mesh versus grid rods).
Device is used to test social behavior, social memory, and preference for social novelty in rodents like mice and rats.
Behavioral testing apparatus used in neuroscience and psychology laboratories to measure spatial learning, memory, and cognitive flexibility in rodents like mice and rats.
Device used to test spatial learning, reference memory, and navigational skills in rodents. It measures how well mice or rats use external visual room cues to find a hidden, submerged escape platform in an opaque pool of water.
The FV3000 is a laser scanning confocal microscope system that captures high-resolution, high-contrast images by scanning samples point by point, enabling precise 3D fluorescence imaging. The system supports inverted and upright configurations and accommodates various objectives with magnifications ranging from 1.25× to 100×, including oil, silicone, and dry lenses, which allows imaging of both macro and micro-scale samples. It is equipped with multiple laser lines for excitation, including 405 nm, 488 nm, 561 nm, and 640 nm, as well as additional lines in some configurations (445 nm, 514 nm, 594 nm, 630 nm), enabling the use of several fluorophores simultaneously. On the detection side, the microscope uses high-sensitivity photomultiplier tube detectors, including GaAsP PMTs and multi-alkali PMTs.
Core provides access, training and service scans for a range of state-of-the-art pre-clinical imaging modalities and high-resolution NMR spectroscopy for anatomy, function, and metabolism. Modalities include bioluminescence, fluorescence, ultrasound, MRI, PET, SPECT and CT, photoacoustic imaging, and image-guided X-ray irradiation.
Software R package for the analysis of kinetic phenotypic screens read as growth curves in 96-well microplates. Implements a benchmarked, simulation-validated pipeline that goes from raw OD600 trajectories to a hit list: plate-level quality control (control CV, Z'-factor, SSMD), within-plate positional correction by median polish (B-score), normalisation to the median of in-plate controls, and hit calling requiring convergence between per-plate ANOVA and a library-wide linear mixed model with Benjamini-Hochberg FDR control. Also extracts kinetic parameters (maximum specific growth rate, maximum OD, lag time) and supports functional principal component analysis and Monte Carlo validation of pipeline operating characteristics.
Software R package to integrate and query microRNA (miRNA) data. It allows retrieve and analyze validated and predicted miRNA-target interactions, as well as their associations with various diseases and drugs.
Software repository that contains curated cross‑reference dataset that links official ICTV virus taxa to their corresponding NCBI Taxonomy identifiers using the SSSOM (Simple Standard for Sharing Ontology Mappings) format. It provides machine‑readable, standardized mappings that enable interoperability between the ICTV taxonomy and widely used NCBI Taxonomy resources.
Structured, machine‑readable interface that exposes the complete ICTV virus taxonomy as an OWL/RDF ontology. It provides programmatic access to official virus taxa, their hierarchical relationships, synonyms, historical names, and metadata, enabling automated reasoning, name resolution, and integration of ICTV taxonomy into bioinformatics tools and databases.
The R package multiMiR, with web server at http://multimir.org, is a comprehensive collection of predicted and validated miRNA-target interactions and their associations with diseases and drugs.
Web tool that uses the ICTV Ontology API to translate any virus name—current, historical, informal, or deprecated—into its official, up‑to‑date taxonomic position within the ICTV (International Committee on Taxonomy of Viruses) taxonomy, the globally recognized standard for virus classification.
Multidisciplinary public university with eight faculties located in the city of Turku in southwestern Finland. The university also has campuses in Rauma and Pori and research stations in Kevo and Själö.
Software tool to perform standard analysis of colony formation assays conducted in 6- to 24-well dishes. ImageJ-plugin that is optimized to perform standard analysis of colony formation assays conducted in 6- to 24-well dishes. The plugin processes each well individually and determines not the colony number, but the area of the well covered with cells, also taking the intensity into account.