Curator Dashboard

An online database for miRNA target prediction and functional annotations.

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• SciCrunch
• 13 years ago - by Anonymous

Electrophysiology core facility that is part of Ion Channels and Transporters in Immunity Research Program.Research area includes ion channel and transporter function and ionic signaling in immune cells.Users who are studying other cell types or organ systems are welcome.Provides assistance with experimental design, training, implementation, and data analysis.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

iCORE Proteomics, previously known as Advanced Proteomics Platform (A~PROMPT) provides proteomics service for research in Singapore. Services include instrumentation use, Protein ID, Whole proteome ID, Targeted proteomics, Labelled free quantitation proteomics (LFQ), TMT proteomics, Post-Translational Modifications proteomics (phospho/Ubi PTM), Clinical proteomics, DIA-proteomics.

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• RRID
• 1 month ago - submitted by Edyta Vieth

A Perl based tool for the identification of differentially enriched regions in tiling microarray data.

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• SciCrunch
• 13 years ago - by Anonymous

Web visualization tool that provides access to interactive exploration of pancreatic islet genomic data. Allows access and exploration of pancreatic islet epigenomic and transcriptomic data produced by different labs worldwide.

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• dkNET
• 5 years ago - submitted by Ko-Wei Lin

public land-grant research university in Stillwater, Oklahoma, United States. The university was established in 1890 under the legislation of the Morrill Act.

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• RRID
• 1 month ago - submitted by Edyta Vieth

Nonprofit, nonpartisan think tank that helps people build meaningful lives. Center for Regional Economics and California Center.

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• SciCrunch
• 13 years ago - submitted by Andrea Stagg

Software package for experimental control from Vision and Cognition Lab at Netherlands Institute for Neuroscience. Matlab based software for fMRI, Psychophysical experimentation and NHP training, with eye control using Measurement and Computing IO card. Interfaces with ISCAN eye tracker and communicates with the MRI console using trigger pulses. Uses Psychtoolbox3 graphics and control engine.

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• RRID-Legacy
• 5 years ago - submitted by Chris Klink

Core is equipped with high-capacity instruments including Illumina NovaSeq systems to process whole genome samples. Provides automated, scalable research sequencing workflows supporting academic, clinical, and industry partners.

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• RRID
• 1 month ago - submitted by Anita Bandrowski

Computes both spliced and unspliced alignments at high accuracy while taking advantage of base quality information and splice site predictions.

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• SciCrunch
• 13 years ago - by Anonymous

SPARC data repository as of 2023 is an open data repository developed as part of the NIH SPARC initiative and has been used by SPARC funded investigator groups to curate and publish high quality datasets related to the autonomic nervous system. We are thrilled that as of August 2022, SPARC is accepting datasets from investigators that are not funded through the NIH SPARC program. The NIH's Common Fund Stimulating Peripheral Activity to Relieve Conditions (SPARC) program aims to transform our understanding of these nerve-organ interactions and ultimately advance neuromodulation field toward precise treatment of diseases and conditions for which conventional therapies fall short.

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• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

Software R package designed to work with pre-normalized data derived from Reverse Phase Protein Arrays (RPPA), downstream of RPPASPACE. Provides a compendium of functions related to analytical pipelines with graphical visualization and figure generation.

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• RRID
• 1 month ago - by Anonymous

A high-performance visualization tool for interactive exploration of large, integrated genomic datasets.

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• SciCrunch
• 13 years ago - by Anonymous

Facility at Advanced Science Research Center of City University of New York provides research resources and services that include nucleic acid extraction and fragmentation, quantitative gene expression analysis, targeted DNA methylation analysis in specific genomic loci of interest, next generation sequencing RNA-seq and ChIP-seq, and single cell genomics.Provides advanced cell sorter with biosafety protection for flow cytometry service, services for RNAScope to allow for in situ hybridization detection of transcriptional targets with spatial resolution.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Core provides support including management of and access to instrumentation cores and other equipment, clinical research coordination, writer, editor, and biostatistician services.

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• RRID
• 3 weeks ago - by Anonymous

It is based on the Galaxy-framework and provides tools for read mapping, transcript reconstruction and quantitation as well as differential expression analysis.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool used for predictions of molecular packing and interactions. General purpose coarse grained force field for molecular dynamics simulations of biomolecular systems Martini 3 is refined model with improved interaction balance, new bead types and expanded ability to include specific interactions representing, for example, hydrogen bonding and electronic polarizability.

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• RRID-Legacy
• 5 years ago - submitted by Nicolai Johansen

Core Facility provides comprehensive bioinformatics support for cancer research, including experimental design, data processing, statistical analysis, and biological interpretation of high-throughput genomic data. Offers expertise in bulk and single-cell RNA sequencing, DNA sequencing and variant analysis, spatial transcriptomics, epigenomics, image analysis, and integrative multi-omics analysis. BISR also develops and maintains computational workflows, provides AI and machine learning expertise, and supports the computational infrastructure needed for large-scale genomic analyses, image processing, and AI-driven research.

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• SciCrunch
• 2 weeks ago - submitted by Edyta Vieth

A large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence. Contnet includes orthology predictions among 1621 complete genomes (1365 bacterial, 92 archaeal, and 164 eukaryotic), covering >7 million proteins and 4 million pairwise orthologs; Orthologous groups, comprising >300000 groups of orthologous proteins and >236000 corresponding gene trees; and inparalog groups, comprising >500000 groups of inparalogs.

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• SciCrunch
• 13 years ago - by Anonymous

Software R package for statistical analysis of mixed ploidy populations.Used for calculation of population structure and differentiation based on single nucleotide polymorphism genotype data from populations of any ploidy level, and/or mixed ploidy levels.

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• RRID-Legacy
• 5 years ago - submitted by Brandon Pickett