Curator Dashboard

Software pipeline to integrate correlative, causal and mechanistic inference approaches into unified framework that systematically infers causal flow of information from mutations to TFs and miRNAs to perturbed gene expression patterns across patients. Used to decipher transcriptional regulatory networks from multi-omic and clinical patient data. Applicable for integrating genomic and transcriptomic measurements from human cohorts.

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• RRID
• 3 years ago - by Anonymous

Software tool to integrate somatic mutation types into comprehensive integrated somatic mutation matrix for downstream analyses.Somatic mutation integration platform that tames allelic heterogeneity, discovers causal mutations, integrates binary PAM and fusion with quantitative CNA data types, and overcomes known obstacles in cancer genetics. Used for systematic integration of protein affecting mutations, gene fusions, and copy number alterations into comprehensive somatic mutational profile.

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• 3 years ago - by Anonymous

Literature review software by DistillerSR Inc. Automates management of literature collection, screening, and assessment using AI and intelligent workflows. From systematic literature review to rapid review to living review, makes any project simpler to manage and configure to produce transparent, audit-ready, and compliant results.

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• 3 years ago - by Anonymous

Software tool to analyze data that are acquired with LECO time-of-flight instruments. Used for processing and analyzing large amounts of data that are acquired with LECO instruments. Offers control of instrument and its accessories, as well as intuitive interface with highly integrated data processing. Mass spectrometry data system to fully accommodate multidimensional chromatographic data.

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• RRID
• 3 years ago - by Anonymous

Software tool for data independent MS/MS deconvolution for comprehensive metabolome analysis. Universal program for untargeted metabolomics that supports multiple instruments (GC/MS, GC/MS/MS, LC/MS, and LC/MS/MS) and MS vendors (Agilent, Bruker, LECO, Sciex, Shimadzu, Thermo, and Waters). Used for untargeted metabolomics and lipidomics supporting any type of chromatography/mass spectrometry methods.

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• RRID
• 3 years ago - by Anonymous

Web based tool for multi-omics integration via intuitive visual analytics. Web based platform for visual analytics of multi-omics data to allow researchers to fuse statistical and visual streams of evidence together to make more informed judgements. Enables to dissect large and complex multi-omics datasets by facilitating pattern recognition and cognitive reasoning through intuitive visual analytics.

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• 3 years ago - by Anonymous

Open source software Python library for sensitivity analysis. Useful in systems modeling to calculate effects of model inputs or exogenous factors on outputs of interest.

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• 3 years ago - by Anonymous

Software MATLAB pipeline that produces CNN-based segmentations of striatal regions of brain based on structural T1w image.

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• 3 years ago - by Anonymous

Software tool for resting state functional connectivity analyses. Allows to get optimal LPF-FD and GEV-DV volume censoring parameters for specified multiband resting state fMRI dataset.

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• 3 years ago - by Anonymous

Web service for statistics with automated data analysis mode.

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• 3 years ago - by Anonymous

Open source software Python application for high resolution analysis of metagenomes using distance trees. Tree based, taxonomy agnostic tool for identification of biologically relevant clades from shotgun metagenomic sequencing. Used for phylogenetic analysis of shotgun metagenomic data.

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• 3 years ago - by Anonymous

BX51WI is for all physiological experiments such as patch clamping and intravital microscopy. Fixed stage and vibration free frame design ensures stability throughout experiment. Use of infrared light protects living cells and offers high penetration depths of thick tissue slices, while high NA optics allow magnification changes without moving objective.

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• 3 years ago - by Anonymous

Temperature controller. Each channel supplies up to 22 watts into load of 10 ohms. Heat set point is controlled automatically in Auto mode via thermistor feedback. Loop speed selector provides three feedback response times to optimize tp thermal stability of device being heated. Heat set-point may also be manually controlled in Manual mode.

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• RRID
• 3 years ago - by Anonymous

THIS TEST is a

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• NIF
• 4 years ago - by Anonymous

Gastric cancer gene mutation data sample and clinical information data set.

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• 4 years ago - submitted by Zhenzhang Li

Gastric cancer gene mutation data sample and clinical information data set.

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• 4 years ago - submitted by Zhenzhang Li

Gastric cancer gene mutation data sample and clinical information data set. Accession number:EGAS00001000597.

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• 4 years ago - submitted by Zhenzhang Li

Gastric cancer gene mutation data sample and clinical information data set Accession number:EGAS00001003512 Dataset:EGAD00001004811

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• 4 years ago - submitted by Zhenzhang Li

Code is written to be run with Matlab version r2020b or higher. Model accepts wave assay pulse amplitude data, and simultaneously solves and fits protofilament deflection models to deduce fundamental biophysical properties of microtubule protofilaments.

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• 4 years ago - submitted by Lucas Murray

Convolutional neural network that calculates 3D positions of user-defined anatomical landmarks on behaving animals from videos taken at multiple angles. Works on recorded video data from multiple cameras. Used for 3D markerless pose estimation and tracking.

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• 4 years ago - submitted by Kevin Chavez Lopez