Curator Dashboard

Software R package to format data, frame column names, provide quick counts of variable combinations and isolate duplicate records, format tabulation results.

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• RRID
• 4 years ago - by Anonymous

Software Python package to perform post-processing of cryo-EM maps. Deep learning model trained on pairs of experimental volumes and atomic model corrected volumes that is able to obtain post-processed maps using as input raw volumes, preferably half maps.

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• RRID
• 4 years ago - by Anonymous

Software tool as multiple sequence alignment formulated as statistical machine learning problem, where optimal profile hidden Markov model for potentially very large family of protein sequences is searched and alignment is decoded.

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• 4 years ago - by Anonymous

Web server for systematically predicting sequence regulatory activities and applying sequence information to human genetics data. Provides global map from any sequence to regulatory activities, as represented by sequence classes, and each sequence class integrates predictions for chromatin profiles like transcription factor, histone marks, and chromatin accessibility profiles across wide range of cell types.

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• dkNET
• 4 years ago - submitted by Ko-Wei Lin

Open source software suite for analysis of fiber photometry data.

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• RRID
• 4 years ago - submitted by Jensen Palmer

Platform to let you gather data from across NCBI databases. Allows to find and download gene, transcript, protein and genome sequences, annotation and metadata.

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• dkNET
• 4 years ago - submitted by Ko-Wei Lin

LED illuminator for BX53 is equivalent to or better than 100 W halogen lamp, delivering brightness appropriate for teaching or contrast methods. Can be customized for different observation methods, such as phase contrast and fluorescence, with modular components.

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• 4 years ago - submitted by yaoxing dou

Software tool for comprehensive conversion of folder with Hypnodyne zmax EDF files into merged European Data Format.

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• 4 years ago - submitted by Frederik D. Weber

Primary access point for compendium of LINCS data with substantial changes in data architecture and APIs, completely redesigned user interface, and enhanced curated metadata annotations to support more advanced, intuitive and deeper querying, exploration and analysis capabilities. LINCS datasets are accessible at data point level enabling users to directly access and download any subset of signatures across entire library independent from originating source, project or assay. Newly designed query interface enables global metadata search with autosuggest across all annotations associated with perturbations, model systems, and signatures.

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• 4 years ago - submitted by Caty Chung

Supports research that requires comprehensive assessment of energy balance and body composition in experimental rodents by providing necessary equipment and expertise. Services include training in the use of equipment, consultation on experiment design, and help with data analysis. Instrumentation includes Bruker TD-NMR LF100 Minispec and TSE Phenomaster System with Integrated Stellar Telemetry.

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• RRID
• 4 years ago - submitted by Scot Kimball

Web service to predict molecular interactions that may occur between target protein and small molecule. Protein small molecule docking web service based on EADock DSS.

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• SciCrunch
• 4 years ago - by Anonymous

Computerized morbidity registration network in Belgium based on general practice data.Contains demographic, clinical, biomedical, and prescription data, registered with computer generated keywords in electronic health record.

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• 4 years ago - by Anonymous

Software tool for calculating average nucleotide identity.

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• 4 years ago - by Anonymous

Software tool that calculates distances between BGCs in order to map BGC diversity onto sequence similarity networks, which are then processed for automated reconstruction of Gene Cluster Families, groups of gene clusters that encode biosynthesis of highly similar or identical molecules.

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• RRID
• 4 years ago - by Anonymous

Open source LED controller for arbitrary spectrum visual stimulation and optogenetics during 2 photon imaging. Device that rapidly time interleaves stimulation and detection epochs during two photon imaging.

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• SciCrunch
• 4 years ago - submitted by Jude Frie

Abstract and indexing database with full text links that is produced by Elsevier Co. Combines expertly curated abstract and citation database with enriched data and linked scholarly literature across wide variety of disciplines.

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• RRID
• 4 years ago - submitted by Duc Tran

Web server predicts RNA secondary structures using deep learning. RNA secondary structure prediction using deep learning with thermodynamic integration.

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• 4 years ago - submitted by Chong Han Ng

Web server is an improved version of IPknot web server, which provides services for predicting RNA secondary structures including wide class of pseudoknots. Can perform RNA secondary structure prediction including pseudoknots for very long sequences. Can predict consensus secondary structure when multiple alignment of RNA sequences is given.

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• 4 years ago - submitted by Chong Han Ng

Provides advanced light microscopy imaging modalities and histological services. Offers training and application support in experimental design, sample preparation, data generation and analysis through to scientific publication and grant assistance.

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• RRID
• 4 years ago - by Anonymous

Software R package that helps format Seurat objects into objects that can be used for trajectory analysis in other packages such as Monocle

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• RRID
• 4 years ago - by Anonymous