Curator Dashboard

Core provides support and assistance for sequencing projects, including experimental design, library preparation, Illumina sequencing, and initial data processing (demultiplexing and FASTQ file generation).

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• SciCrunch
• 1 month ago - submitted by Edyta Vieth

A large multidisciplinary world leader in genomic research with locations in Rockville, Maryland and San Diego, California. It was formed through the merger of several affiliated and legacy organizations - The Institute for Genomic Research (TIGR) and The Center for the Advancement of Genomics (TCAG), The J. Craig Venter Science Foundation, The Joint Technology Center, and the Institute for Biological Energy Alternatives (IBEA).

• Organization
• SciCrunch
• 17 years ago - submitted by Andrea Stagg

Software R package to help explain which variables are most important in random forests. Various variable importance measures are calculated and visualized in different settings in order to get idea on how their importance changes classification or regression model accuracy.

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• RRID-Legacy
• 5 years ago - submitted by Ron Gadot

Research Engineering and Infrastructure Team (REIT) at the Faculty of Electrical Engineering, Mathematics and Computer Science at TU Delft is dedicated to support students and researchers with their expertise in software engineering, data science, and high-performance computing. Their mission is to enable researchers to focus on their research by providing them with the best possible research infrastructure and support.

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• RRID
• 2 months ago - submitted by Armand Guicherit

An independent, nonprofit institute that provides research, development, and technical services to government and commercial clients worldwide. Their mission is to improve the human condition by turning knowledge into practice through cutting-edge study and analysis in health and pharmaceuticals, education and training, surveys and statistics, advanced technology, international development, economic and social policy, energy and the environment, and laboratory and chemistry services.

• Organization
• SciCrunch
• 15 years ago - submitted by Andrea Stagg

Web tool for integrative visualization of multiple omic datasets onto KEGG pathways. Supports integrated visualization of multiple species of different biological kingdoms and offers user possibility to request any other organism present in KEGG database.

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• dkNET
• 5 years ago - submitted by Maryann Martone

Located on the 3rd floor of the Life Science Laboratory on the University of Massachusetts Amherst campus core provides services and resources for conducting research with human subjects. The CH2P has service lines supporting clinical sample collection, physiological, biomechanical, neuromechanical, and behavioral research.

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• SciCrunch
• 1 month ago - submitted by Edyta Vieth

A generic sequence comparison tool for visualizing genome alignments both within and between species.

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• SciCrunch
• 13 years ago - by Anonymous

Core facility provides Thermo Element XR high-resolution ICPMS,Thermo X-Series II quadrupole ICPMS,Thermo iCap 7400 ICP-OES, Photon Machines Analyte 193H excimer laser system, and Zygo NewView Element XR7200 Vertical Scanning Interferometer for depth profiling and analysis of laser pit morphology.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Core provides computational support for the full research lifecycle for researchers working with high-throughput biological data. Services span from consultation to data presentation.

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• SciCrunch
• 13 years ago - by Anonymous

Software package for RNA-Seq-based transcriptomics. Used to analyse Illumina/Solexa-based RNA-Seq data, Affymetrix data and generic tabular two color or single channel array data. Offers variety of quality control methods that can be used to gain overview of experimental data technical quality and structure.

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• SciCrunch
• 13 years ago - by Anonymous

Independent biomedical research and science education organization in Grand Rapids, MI. Committed to improving health and changing lives of current and future generations through biomedical research and science education.

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• RRID-Legacy
• 5 years ago - submitted by Edyta Vieth

Software toolkit for unbiased single-cell transcriptomic data cell type identification. Provides a meta-database of thousands of human and mouse cell identity markers curated from multiple sources, along with methods for cell type prediction based on marker gene overlaps or gene set enrichment.

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• RRID
• 2 weeks ago - submitted by Igor Dolgalev

The Need for an Up-To-Date Synthesis of Next Generation Sequencing Know-How.

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• SciCrunch
• 13 years ago - by Anonymous

Software R package implementating multiple major classes of statistical regression models.

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• RRID-Legacy
• 5 years ago - submitted by Brandon Pickett

Private, not-for-profit acute care hospital located in Providence, Rhode Island, and is the state's largest hospital.

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• RRID
• 1 week ago - submitted by Edyta Vieth

Software tools for discriminative motif discovery using regression methods.

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• SciCrunch
• 13 years ago - by Anonymous

Core provides Human Immune System as preclinical in vivo model to study human immune system in experimental tractable animal model e.g. immune response to human tumors that readily grow in HIS-mice. Offers immune expertise, experimental procedures and data analysis of immune based assays, such as flow cytometry.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Cryo-EM core provides access to sample preparation equipment, cryo-transmission electron microscopes, and service and training in all aspects of single particle electron microscopy and cryo-electron tomography. Core is continually implementing new equipment and methods to remain current.

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• SciCrunch
• 4 days ago - submitted by Edyta Vieth

THIS RESOURCE IS NO LONGER IN SERVICE.Documented on April 14,2022. Database of comprehensive information on the approximately 600 prokaryote species that are present in the human oral cavity. The majority of these species are uncultivated and unnamed, recognized primarily by their 16S rRNA sequences. The HOMD presents a provisional naming scheme for the currently unnamed species so that strain, clone, and probe data from any laboratory can be directly linked to a stably named reference entity. The HOMD links sequence data with phenotypic, phylogenetic, clinical, and bibliographic information. Full and partial oral bacterial genome sequences determined as part of this project and the Human Microbiome Project, are being added to the HOMD as they become available. HOMD offers easy to use tools for viewing all publicly available oral bacterial genomes. Data is also downloadable.

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• SciCrunch
• 16 years ago - by Anonymous