Curator Dashboard

Facilitates multi‐disciplinary collaboration among imaging scientists and clinicians at academic institutions within the Milwaukee region. Manages MCW research imaging facilities and provides access to MCW faculty imaging specialists. Services include performing mixed research and advanced clinical outpatient imaging to support clinical evaluation trials and basic science/technology research.

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• RRID
• 5 months ago - by Anonymous

An application ontology devoted to the standardized recording of data related to Fanconi Anemia (FA). This ontology was created using an OWL file provided by Dr. Ada Hamish (and Francois Schiettecatte) at the Centers for Mendelian Genetics, with their permission. Their original ontology can be found at: http://phenodb.net/help/features. Modifications were made using HPO, OMIM, NCI, and SNOMED. Novel classes pertaining to FA were added and defined as appropriate.

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• SciCrunch
• 13 years ago - by Anonymous

Comprehensive structural biology resource.Provides high throughput protein laboratory for protein engineering, protein purification facilities for small- and large-scale protein production, macromolecular crystallization and crystallography laboratories for solving crystal structures of biological molecules, and X-ray facility with access to high energy synchrotron radiation. Provides expert guidance to researchers through every stage of project, collaborating and consulting with researchers who use the facilities. Service categories are Chemical, Material and Protein Characterization, Molecular Biology. Services include Cloning, Crystallization, Differential thermal analysis, Drug development, NMR (small molecule), PCR, Protein crystallography, Protein engineering, Protein production, Structure determination, Xray.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth

Core is a fee-for-use COBRE core that houses multi-photon microscopes and light microscopes that allow high-resolution visualization of cell and tissue structure (mitochondrial networks, collagen structure), metabolic function (optical redox and NADH fluorescence lifetime measurements), and biomolecular composition (autofluorescent metabolic cofactors, lipid deposition).

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• RRID
• 5 months ago - by Anonymous

A structured controlled vocabulary of stage-specific anatomical structures of the human. It has been designed to mesh with the mouse anatomy and incorporates each Carnegie stage of development (CS1-20). The timed version of the human developmental anatomy ontology gives all the tissues present at each Carnegie Stage (CS) of human development (1-20) linked by a part-of rule. Each term is mentioned only once so that the embryo at each stage can be seen as the simple sum of its parts. Users should note that tissues that are symmetric (e.g. eyes, ears, limbs) are only mentioned once.

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• SciCrunch
• 13 years ago - by Anonymous

Provides advanced instrumentation as well as high level technical and scientific expertise in multi dimensional Flow Cytometry and Cell Sorting, to facilitate science, improve the quality, and advance the scope of MSK research.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth

Core services include conception, execution and evaluation of functional magnetic resonance imaging studies, fMRI, and positron emission tomography studies, PET. Provides expertise in performance of functional imaging studies.

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• RRID
• 4 months ago - submitted by Rik Sijben

Ontology that contains terms necessary for describing and categorizing concepts related to Major Histocompatibility Complex, in general, for a number of model species, and also for humans.

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• SciCrunch
• 13 years ago - by Anonymous

Software R package provides misc functions for training and plotting classification and regression models.Contains tools for data splitting, pre-processing, feature selection, model tuning using resampling, and variable importance estimation, as well as other functionality.

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• RRID-Legacy
• 6 years ago - by Anonymous

Multi-organism database containing interactions and roles of proteins in inter- and intracellular signaling and transcriptional and post-transcriptional regulation.

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• RRID
• 4 months ago - by Anonymous

Ontology of National Drug File - Reference Terminology Public Inferred Edition, 2008_03_11

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• SciCrunch
• 13 years ago - by Anonymous

a package for automated de novo identification of repeat families from genomic sequences Proper identification of repetitive sequences is an essential step in genome analysis. The RECON package performs de novo identification and classification of repeat sequence families from genomic sequences. The underlying algorithm is based on extensions to the usual approach of single linkage clustering of local pairwise alignments between genomic sequences. Specifically, our extensions use multiple alignment information to define the boundaries of individual copies of the repeats and to distinguish homologous but distinct repeat element families. RECON should be useful for first-pass automatic classification of repeats in newly sequenced genomes.

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• RRID-Legacy
• 5 years ago - by Anonymous

Core specializes in artificial intelligence-based approaches to elucidate relationships between large imaging, bioenergetics, genomic, and proteomic data sets. Provided services include: 1) foundational training for those getting started with high-performance computing and Arkansas Research Platform (ARP), 2) training and support for the collaborative use of a 508 TB data storage server exclusively maintained for and catering to AIMRC researchers, 3) training for Python programming, basic data mining, and machine learning, 4) training and support for using open-source deep learning based biomedical imaging resources (e.g., ZeroCostDL4Mic and Bioimage Model Zoo), and 5) customized solutions for deep learning based and large foundational models based biomedical imaging analysis, multi-omics data integration and analysis, and quantitative analysis pipelines for large data sets.

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• RRID
• 4 months ago - by Anonymous

Ontology to support systematic description of, and interoperable queries on, human studies and study elements.

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• SciCrunch
• 13 years ago - by Anonymous

ABRF CoreMarketplace project created for core facilities tracking. CoreMarketplace (CM) is searchable list of active core facilities that perform scientific research. The CM was initially created by Vermont IDeA Network of Biomedical Research Excellence (INBRE). CoreMarketplace is associated with Association of Biomolecular Research Facilities (ABRF) which is membership association to sponsor and help members to incorporate new biotechnology into their laboratories.

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• RRID-Legacy
• 5 years ago - submitted by Edyta Vieth

Core facility provides services including generation of new monoclonal antibodies , scaleup production , purification of antibody from existing cell lines and antibody conjugation.

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• RRID
• 3 months ago - by Anonymous

Ontology that encodes agreement among experts about how Emergency Department (ED) chief complaints are grouped into syndromes of public health importance (consensus definitions).

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• SciCrunch
• 13 years ago - by Anonymous

Software functional programming tools for R. Used for working with functions and vectors.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software R Package to calculates partial and semi-partial (part) correlations along with p-value. Fast Calculation to Semi-partial Correlation Coefficients.

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• RRID
• 3 months ago - by Anonymous

A mature foundational ontology developed at the NASA Jet Propulsion Laboratory, currently containing over 6000 concepts organized in 200 ontologies represented in OWL, whose top level concepts include Representation (math, space, science, time, data), Realm (Ocean, Land Surface, Terrestrial Hydroshere, Atmosphere, etc.), Phenomena (macro-scale ecological and physical), Processes (micro-scale physical, biological, chemical, and mathematical), Human Activities (Decision, Commerce, Jurisdiction, Environmental, Research). SWEET is now officially under the governance of the ESIP foundation.

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• SciCrunch
• 13 years ago - by Anonymous