Curator Dashboard

Software Python library for working with metadata in EBRAINS Knowledge Graph. High-level Python API for EBRAINS Knowledge Graph.

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• RRID
• 2 years ago - by Anonymous

Core offers mouse behavioral equipment and assays to test motor, cognitive, and affective behaviors. Trained users have access to behavioral testing rooms and procedure room. MBC staff offers consultation, training, and guidance in execution and interpretation of assays.

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• SciCrunch
• 2 years ago - submitted by Edyta Vieth

Joint effort by Harvard Medical School, Dana-Farber Cancer Institute, Boston Childrens Hospital, and Massachusetts General Hospital to provide cryo-EM instrumentation and expertise for Harvard structural biology community. Facility offers consultation and training by staff in specimen preparation, microscope operation, image acquisition, and data analysis.

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• SciCrunch
• 2 years ago - submitted by Edyta Vieth

Software R package as global weighted model for disease ontology enrichment analysis. Used for annotating and enrichment analysis with disease ontology.

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• 2 years ago - submitted by Liang Cheng

Offers increased imaging fields of view to accommodate larger samples in vivo and enables high-resolution imaging of ex vivo samples. Manual x-ray filter assembly provides opportunities to optimize imaging protocols and coupled with the high-resolution, high-speed integrated platform.

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• 2 years ago - by Anonymous

MadicLab Box series uses PSA series microscopic PET technology for small animals. Compact, benchtop body design. Provides advanced technical support for whole-body imaging and in vivo characterization of preclinical small animal models.

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• 2 years ago - by Anonymous

Core specializes in single cell and spatial transcriptomics, and multiomics. Provides custom services, education, training and expertise in multiple high-throughput single cell technologies.

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• 2 years ago - by Anonymous

Service facility offering generation of novel transgenic mouse models using CRISPR/Cas9 gene editing technology. Standard service includes consultation, design, testing, prep, mouse embryo microinjection, and genotyping.

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• SciCrunch
• 2 years ago - submitted by Edyta Vieth

Centralized core specializing in survival surgery, technical procedures, and ultrasound imaging for rats and mice and assistance for surgical procedures in other species.

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• SciCrunch
• 2 years ago - submitted by Edyta Vieth

Offers statistical expertise and services. Provides assistance and collaboration in study design, grant applications, protocol development, data analysis, publication preparation, and statistical education.

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• SciCrunch
• 2 years ago - submitted by Edyta Vieth

Software R package to compute gene expression signature scores.

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• 2 years ago - by Anonymous

Biotechnology company that specializes in collection and analysis of molecular and clinical data to advance precision medicine.

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• 2 years ago - by Anonymous

Quanteon 4 laser flow cytometer that can be configured with up to 25 independent photomultipliers.

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• RRID
• 2 years ago - by Anonymous

Databases utilize rich ad-hoc query system for the analysis of public health data. Reports and other query systems are also available.

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• 2 years ago - submitted by Yuelin He

Website and database providing access to integrated, high-precision samples of American population drawn from sixteen federal censuses, from the American Community Surveys of 2000-present, and from the Puerto Rican Community Surveys of 2005-present. Preserves and harmonizes U.S. census microdata and provides easy access to this data with enhanced documentation.

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• 2 years ago - submitted by Yuelin He

Vectra 3 automated quantitative pathology imaging system, together with the inForm software, provides multispectral and automated multi-slide imaging of up to 6 slides to detect and measure weakly expressed and overlapping biomarkers in H and E, IHC or IF intact FFPE tissue sections or TMAs within familiar digital pathology workflow.

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• 2 years ago - by Anonymous

Software application as dendrimeric DNA coordinate barcoding design for spatial RNA sequencing, which offers both high sensitivity and high resolution in mRNA detection.

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• 2 years ago - by Anonymous

Public archive of raw sequence data in National Genomics Data Center as part of the China National Center for Bioinformation. GSA accepts worldwide data submissions, performs data curation and quality control for all submitted data. Provides data storage and sharing services.

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• RRID
• 2 years ago - by Anonymous

Provides open access to suite of resources, with the aim to translate big data into big discoveries. Offers range of resources for biological big data deposition, integration, and translation.

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• 2 years ago - by Anonymous

Software application as ETL implementation for EuCanImage, encouraging semantic interoperability of clinical data obtained in studies by transforming it into machine-readable format following FHIR standards. This parser uses FHIR Resources in order to create dictionaries following FHIR compliant structure. Code Language is written in Python 3.11. Outputs are JSON files compliant with FHIR 4.3 schemas.This script is specifically created for the Extract, Transform and Load implementation for EuCanImage, and will follow the structures obtained from the REDCap databases within the study.

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• 2 years ago - submitted by Aldar Cabrelles