Curator Dashboard

Provides flexibility to choose from up to 30 fluorescence channels utilizing up to 5 lasers with up to 30 independent detectors.

• Resource
• RRID
• 1 year ago - submitted by Diego Salas-Benito

Free online tool for performing codon optimization to improve gene expression. GenScript’s patented algorithms are integrated into the tool to optimize the computing capability of high-performance sequence generation. Used to optimize design of wild type or recombinant gene sequences towards higher expression in prokaryotic and mammalian expression systems.

• Resource
• RRID
• 1 year ago - submitted by Diego Salas-Benito

Technology platform offering infrastructure and expertise in omics technologies, sequencing and data analysis. Organized in Technology Units: Short-Read, Long-Read, Single-Cell, Spatial Omics, Bioinformatics, and OpenLab.

• Resource
• RRID
• 1 year ago - by Anonymous

Core provides consultation, expert advice and streamlined library preparation, next generation sequencing and data analysis services.

• Resource
• RRID
• 1 year ago - by Anonymous

Cancer Therapeutics Response Portal (CTRP) links genetic, lineage, and other cellular features of cancer cell lines to small-molecule sensitivity with the goal of accelerating discovery of patient-matched cancer therapeutics. CTRP can be mined to develop insights into small-molecule mechanisms of action and novel therapeutic hypotheses, and to support future discovery of drugs matched to patients based on predictive biomarkers.

• Resource
• RRID
• 1 year ago - by Anonymous

• Resource
• RRID
• 1 year ago - by Anonymous

• Resource
• RRID
• 1 year ago - submitted by Xiaohui Guo

vicky test

• Resource
• RRID
• 1 year ago - submitted by Vicky Guo

Core provides custom built ad hoc optical microscopy solutions, advanced image analysis, and consultation services to researchers across the Penn campus and beyond.

• Resource
• SciCrunch
• 1 year ago - submitted by Edyta Vieth

International registry for wide range of conditions that may be associated with difference or disorder of sex or pubertal development. Registry platform and network that aims to improve clinical practice, research and understanding of wide range of rare conditions affecting sex development and maturation through sharing of knowledge and experience.

• Resource
• RRID
• 1 year ago - by Anonymous

Small sample tissue homogenizer for 0.5mL or 2mL tubes at 3.000, 4.000 or 5.000 rpm.

• Resource
• RRID
• 1 year ago - by Anonymous

Software tool to determine contribution of known mutational processes to tumor sample. Delineating mutational processes in single tumors distinguishes DNA repair deficiencies and patterns of carcinoma evolution.

• Resource
• RRID
• 1 year ago - by Anonymous

Software application provides dataset of all student-system interactions collected over 2 years by Santa, multi-platform AI tutoring service with more than 780K users in Korea available through Android, iOS and web.

• Resource
• RRID
• 1 year ago - by Anonymous

Software fast, reference-independent, allele-aware scaffolding tool based on Hi-C data. Allele-aware scaffolding tool that uses Hi-C data to scaffold haplotype-phased genome assemblies into chromosome-scale pseudomolecules.

• Resource
• RRID
• 1 year ago - submitted by Zhenzhu Li

Software tool as trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

• Resource
• RRID
• 1 year ago - submitted by Zhenzhu Li

Software tool as implicit or explicit water model based docking with Autodock vina engine, supporting pharmacophore /position constrained docking.Facilitates drug design with support for explicit or implicit waters, pharmacophore or position-constrained docking, and external torsion parameters (akin to amber/gaff/charmm force fields). Water Model supported protein-ligand docking with Autodock Vina engine.

• Resource
• RRID
• 1 year ago - submitted by Zhenzhu Li

Software package to analyze amino acid content and hydrophobicity profile of given set of protein sequences in fasta file. Used for analysis of amino acid composition and hydrophobicity of test sequences from fasta files.

• Resource
• RRID
• 1 year ago - by Anonymous

Software set of command-line and R tools for performing Random-walk with performing Random-walk on multiplex networks in any species.

• Resource
• RRID
• 1 year ago - submitted by Matthew Lane

Compact, dual-channel fluorometer designed to provide highly sensitive fluorescent detection when quantifying nucleic acids. Fluorometer is optimized with preprogrammed settings for Promega QuantiFluor Dye Systems (QuantiFluor dsDNA, RNA and ssDNA Systems) to quantitate nucleic acids and offers flexibility to create customized methods and quantitation settings for other fluorescent dyes.

• Resource
• RRID
• 1 year ago - by Anonymous

Website to identify the effects of certain gene mutations on splice behaviour.

• Resource
• RRID
• 1 year ago - by Anonymous