Curator Dashboard

Database that provides access to organic compounds data compiled and distributed by NIST under the Standard Reference Data Program.

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• 1 year ago - by Anonymous

Web-based application for automated structural classification of chemical entities. Automated chemical classification with a comprehensive, computable taxonomy. Provides hierarchical chemical classification of chemical entities as well as structure-based textual description, based on chemical taxonomy named ChemOnt, which covers 4825 chemical classes of organic and inorganic compounds.

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• 1 year ago - by Anonymous

Software extension of t-distributed stochastic neighbor embedding, the spatially resolved t-SNE (SpaSNE) designed to preserve both global gene expression and spatial structure for spatially resolved profiling data. Gives comprehensive low-dimensional visualization that could best reflect the molecular similarities of cells and the spatial interactions between cells.

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• 1 year ago - submitted by Chen Tang

Software collection consisting of Python-based framework for connectome-based analysis using Ray to parallelize CPM and set of scripts to perform common operations and analyses on the Human Connectome Project's neuroimaging data with focus on task-based fMRI.

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• 1 year ago - submitted by Tobias Bachmann

Software tool for calling and analyzing SNVs from spatial transcriptomics data.

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• 1 year ago - submitted by Yi Liu

IPD2 is updated version of InfectiousPathogenDetector, in-silico GUI-based automated pathogen analysis pipeline for seamless analysis of data from heterogenous NGS platforms. IPD performs integrated variants analysis, along with systematic quantification of pathogen genomes. IPD additionally has an in-built SARS-CoV-2 analysis module, for assignment of viral clades of the samples analyzed and an automated report generation.

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• 1 year ago - by Anonymous

Core performs standard-of-care and advanced molecular testing for patients with cancer, and to provides special expertise in solid tumors. Services include targeted gene sequencing, microsatellite instability testing, fluorescence in situ hybridization (FISH), and next-generation sequencing (NGS). CCGL is staffed with board-certified surgical pathologists and board-certified molecular pathologists who can properly evaluate the quality of samples submitted for testing as well as make correlations between the pathologic diagnosis of a tumor and the molecular findings in the tumor.

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• 1 year ago - by Anonymous

Community-driven cancer classification platform encompassing rare and common cancers that provides clinically relevant and appropriately granular cancer classification for clinical decision support systems and oncology research. Cancer classification system for precision oncology.

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• 1 year ago - by Anonymous

International data-sharing consortium focused on generating an evidence base for precision cancer medicine by integrating clinical-grade cancer genomic data with clinical outcome data of cancer patients treated at multiple institutions worldwide.

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• 1 year ago - by Anonymous

Web-based framework that serves the dual-purpose of being content repository for tRFs and tool for interactive exploration of these newly discovered molecules. Framework for interactive exploration of mitochondrial and nuclear tRNA fragments. Can report comparative information on how tRF is distributed across all anticodon/amino acid combinations, provides alignments between tRNA and multiple tRFs with which user can interact, provides details on published studies that reported tRF as expressed.

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• 1 year ago - by Anonymous

Software tool to embed scRNA-seq data into species-agnostic latent space to overcome batch effect and identify cell states shared between species. Deep learning algorithm for cross-species integration of scRNA-seq data.

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• 1 year ago - by Anonymous

Core provides Untargeted Metabolomics, Untargeted Lipidomics, Targeted Metabolomics, Metabolomics Flux and analysis services.

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• 1 year ago - by Anonymous

Protein characterization system that automated the Western blotting process from protein separation, immunoprobing, detection, and analysis of data.Gel-free, blot-free, and hands-free. It used glass rods and tubes to form a column that separated proteins by molecular weight. The Wes system was discontinued on July 30, 2021, but ProteinSimple will continue to support the platform through July 30, 2026. Users can upgrade to Jess or Abby to get the functionality of Wes with additional features.

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• 1 year ago - by Anonymous

Software Python package for correcting sequencing errors within Short Tandem Repeat regions from Oxford Nanopore (ONT) sequencing data and genotyping monoallelic STR regions.

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• 1 year ago - submitted by Gyumin Park

Company produces anaerobic workstations. Offers range of units to suit all sizes of laboratories and will consider manufacture of special cabinets to customers' own specification. Anaerobic workstations can also be used for microaerophylic and other types of work by using different gas supplies.

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• 1 year ago - by Anonymous

Commercial company, operating within healthcare technology sector, specifically focused on oncology. Develops oncology cloud platform, integrating clinical data and providing insights to cancer care providers and life science companies. Provides real-world evidence solutions, enabling collection, analysis, and interpretation of data from oncology patients.

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• 1 year ago - by Anonymous

Mass spectrometer combines faster throughput, deeper coverage, and higher sensitivity while delivering accurate and precise quantitation over high dynamic range. Suited for accurate and precise quantitation at unprecedented depth of coverage and higher throughput from single cells to bulk samples.

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• 1 year ago - by Anonymous

Scanner for in-vivo, low radiation imaging. Offers new micro-CT spatial beam shaper, which reduces absorbed radiation dose by up to five times while maintaining high quality image output. High throughput, high speed, microCT for scanning small laboratory animals including mice and rats. Has highly sensitive flat-panel detector that is able to deliver images of mouse heart and lung activities without using contrast agent, reducing animal stress and cost of study. Full-body animal scan can take 8 seconds or less, thus reducing overall run times and increasing the speed of data collection. Results can be directly sent to mobile devices for volume rendering and manipulations using software supplied.

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• 1 year ago - by Anonymous

Fully motorized system allows automation of complex multidimensional experiments. Uses motorized nosepiece to focus onto sample, enabling stage to be fixed for added stability.

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• 1 year ago - by Anonymous

Online database provides collection of gene sets based on quantitative inhibition and/or drug-induced gene expression changes data of drugs and compounds. Allows users to search, view and download drugs/compounds and gene sets.

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• 1 year ago - submitted by Weihao Tang