Searching across hundreds of databases
PeptideAtlas provides a multi-organism, publicly accessible compendium of peptides identified in a large set of tandem mass spectrometry proteomics experiments collected for human, mouse, yeast, and several other organisms.
(last updated: Nov 28, 2017)
Data or Model Molecule| Accession | Sample Title | Summary | Organism | Characteristics | Instrument | Treatment | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| PAe000829 | HS1_0505_Neutrophil | HS1_0505_Neutrophil | LTQ | ||||||||
| PAe000798 | H293b-2nd-c-500ug | H293b-2nd-c-500ug | LTQ | ||||||||
| PAe001721 | Nuc_Hs_Tcell_Nuc6 | Nuc_Hs_Tcell_Nuc6 | LTQ | PMID:17519225 | |||||||
| PAe000076 | cdc15_cdc23_oldICAT | S. cerevisiae cdc15 vs cdc23 mutant comparison. This was the first experiment done in this series. The older ICAT reagent was used. | LTQ | ||||||||
| PAe000811 | H293b-b-200ug | H293b-b-200ug | LTQ | ||||||||
| PAe000821 | COPD7_1105_CD4 | COPD7_1105_CD4; Check detail in Sample Description. | LTQ | ||||||||
| PAe000851 | H293CoCl2-b1-200ug | H293CoCl2-b1-200ug | LTQ | ||||||||
| PAe000352 | Li_OGE1_3-10_LTQ | Li_OGE1_3-10_LTQ | LTQ | ||||||||
| PAe000858 | HS6_1105_CD4 | HS6_1105_CD4 | LTQ | ||||||||
| PAe000116 | Human Erythroleukemia K562 cell line,Q | Human huamn erythroleukemia K5632 cell line I think... | Human | K562 (erythroleukemia) | LTQ | K562 grown in suspension. | Proteins in the pooled fractions were alkylated with iodoacetamide, desalted into 100 mM NH₄HCO₃, digested, lyophilized, and processed in the same manner as sample 1 (referring PSM1018) and sample 2 (referring PSM1019). | Cells were washed twice by centrifugation, and pellets were flash frozen in liquid nitrogen. Cell pellets were suspended in lysis buffer (140mM potassium phosphate, pH 7.4, 150mM NaF, 1mM Na₃VO₄, 6mM EDTA, 6mM EGTA, 250mM NaCl, 4mM DTT) containing 40µg/mL leupeptin, 5µg/mL pepstatin A, 4mM benzamidine, and 20mM PMSF and sonicated 4 × 15 s at 4°C (Branson, microtip probe). Lysates were centrifuged at 200000g for 30 min at 4°C and soluble proteins recovered in the supernatant. Typically 10⁸ cells yielded ~15mg of protein. | Proteins were homogenized in lysis buffer on a gel filtration column (Sephacryl HR300 (26/60), Amersham) equilibrated in lysis buffer. The column was run at 1.3 mL/min, collecting 8-mL fractions over the included volume. | PMID:15228325 | |
| PAe000866 | H293b-2nd-a-400ug | H293b-2nd-a-400ug | LTQ | ||||||||
| PAe000853 | H293-b-200ug | H293-b-200ug | LTQ | ||||||||
| PAe000818 | HS4_0805_CD8 | HS4_0805_CD8 | LTQ | ||||||||
| PAe000805 | HS4_0805_CD4 | HS4_0805_CD4 | LTQ | ||||||||
| PAe000831 | HS1_0505_CD4 | HS1_0505_CD4 | LTQ | ||||||||
| PAe001647 | HsBrain2_PS | HsBrain2_PS | LTQ | ||||||||
| PAe001646 | HsBrain1_PE | HsBrain1_PE | LTQ | ||||||||
| PAe000861 | 03-H293CoCl2-40uL | 03-H293CoCl2-40uL | LTQ | ||||||||
| PAe001734 | PM_Hs_Tcell_PlasmaMembrane1 | PM_Hs_Tcell_PlasmaMembrane1 | LTQ | PMID:17519225 | |||||||
| PAe000808 | HS3_0805_Monocyte | HS3_0805_Monocyte | LTQ |
Welcome to the FDI Lab - SciCrunch.org Resources search. From here you can search through a compilation of resources used by FDI Lab - SciCrunch.org and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that FDI Lab - SciCrunch.org has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on FDI Lab - SciCrunch.org then you can log in from here to get additional features in FDI Lab - SciCrunch.org such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into FDI Lab - SciCrunch.org you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
The SciCrunch Infrastructure was developed as a cooperative data platform to be used by diverse communities in making data more FAIR.
scicrunch.org
