Searching the Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Ordered patterning of the sensory system is susceptible to stochastic features of gene expression.

Ritika Giri | Dimitrios K Papadopoulos | Diana M Posadas | Hemanth K Potluri | Pavel Tomancak | Madhav Mani | Richard W Carthew
eLife | 2020

Sensory neuron numbers and positions are precisely organized to accurately map environmental signals in the brain. This precision emerges from biochemical processes within and between cells that are inherently stochastic. We investigated impact of stochastic gene expression on pattern formation, focusing on senseless (sens), a key determinant of sensory fate in Drosophila. Perturbing microRNA regulation or genomic location of sens produced distinct noise signatures. Noise was greatly enhanced when both sens alleles were present in homologous loci such that each allele was regulated in trans by the other allele. This led to disordered patterning. In contrast, loss of microRNA repression of sens increased protein abundance but not sensory pattern disorder. This suggests that gene expression stochasticity is a critical feature that must be constrained during development to allow rapid yet accurate cell fate resolution.

Pubmed ID: 32101167

Publication data is provided by the National Library of Medicine ® and PubMed ®. Data is retrieved from PubMed ® on a weekly schedule. For terms and conditions see the National Library of Medicine Terms and Conditions.

This is a list of tools and resources that we have found mentioned in this publication.


MATLAB (tool)

RRID:SCR_001622

Multi paradigm numerical computing environment and fourth generation programming language developed by MathWorks. Allows matrix manipulations, plotting of functions and data, implementation of algorithms, creation of user interfaces, and interfacing with programs written in other languages, including C, C++, Java, Fortran and Python. Used to explore and visualize ideas and collaborate across disciplines including signal and image processing, communications, control systems, and computational finance.

View all literature mentions

Fiji (tool)

RRID:SCR_002285

Software package as distribution of ImageJ and ImageJ2 together with Java, Java3D and plugins organized into coherent menu structure. Used to assist research in life sciences.

View all literature mentions

Adobe Photoshop (tool)

RRID:SCR_014199

Software for image processing, analysis, and editing. The software includes features such as touch capabilities, a customizable toolbar, 2D and 3D image merging, and Cloud access and options.

View all literature mentions

y[1] w[1118]; PBac{y[+]-attP-9A}VK00022 (organism)

RRID:BDSC_9740

Drosophila melanogaster with name y[1] w[1118]; PBac{y[+]-attP-9A}VK00022 from BDSC.

View all literature mentions

y[1] w[1118]; PBac{y[+]-attP-3B}VK00037 (organism)

RRID:BDSC_9752

Drosophila melanogaster with name y[1] w[1118]; PBac{y[+]-attP-3B}VK00037 from BDSC.

View all literature mentions

w[1118] (organism)

RRID:BDSC_3605

Drosophila melanogaster with name w[1118] from BDSC.

View all literature mentions

sens[E2] red[1] e[1]/TM6B, Tb[+] (organism)

RRID:BDSC_5311

Drosophila melanogaster with name sens[E2] red[1] e[1]/TM6B, Tb[+] from BDSC.

View all literature mentions