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SPINK1, PRSS1, CTRC, and CFTR Genotypes Influence Disease Onset and Clinical Outcomes in Chronic Pancreatitis.

Wen-Bin Zou | Xin-Ying Tang | Dai-Zhan Zhou | Yang-Yang Qian | Liang-Hao Hu | Fei-Fei Yu | Dong Yu | Hao Wu | Shun-Jiang Deng | Jin-Huan Lin | An-Jing Zhao | Zhen-Hua Zhao | Hong-Yu Wu | Jia-Hui Zhu | Wei Qian | Lei Wang | Lei Xin | Min-Jun Wang | Li-Juan Wang | Xue Fang | Lin He | Emmanuelle Masson | David N Cooper | Claude Férec | Zhao-Shen Li | Jian-Min Chen | Zhuan Liao
Clinical and translational gastroenterology | 2018

Rare pathogenic variants in the SPINK1, PRSS1, CTRC, and CFTR genes have been strongly associated with a risk of developing chronic pancreatitis (CP). However, their potential impact on the age of disease onset and clinical outcomes, as well as their potential interactions with environmental risk factors, remain unclear. These issues are addressed here in a large Chinese CP cohort.

Pubmed ID: 30420730

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MutationTaster (tool)

RRID:SCR_010777

Evaluates disease-causing potential of sequence alterations.

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PROVEAN (tool)

RRID:SCR_002182

A software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein.

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MutationAssessor (tool)

RRID:SCR_005762

A web server that predicts the functional impact of amino-acid substitutions in proteins, such as mutations discovered in cancer or nonsynonymous polymorphisms. The functional impact is assessed based on evolutionary conservation of the affected amino acid in protein homologs. The method has been validated on a large set (51k) of disease associated (OMIM) and polymorphic variants.

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