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Clinical Relation Extraction Toward Drug Safety Surveillance Using Electronic Health Record Narratives: Classical Learning Versus Deep Learning.

Tsendsuren Munkhdalai | Feifan Liu | Hong Yu
JMIR public health and surveillance | 2018

Medication and adverse drug event (ADE) information extracted from electronic health record (EHR) notes can be a rich resource for drug safety surveillance. Existing observational studies have mainly relied on structured EHR data to obtain ADE information; however, ADEs are often buried in the EHR narratives and not recorded in structured data.

Pubmed ID: 29695376

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Associated grants

  • Agency: NIDA NIH HHS, United States
    Id: R01 DA045816
  • Agency: NHLBI NIH HHS, United States
    Id: R01 HL125089
  • Agency: NHLBI NIH HHS, United States
    Id: R01 HL137794

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MetaMap (tool)

RRID:SCR_015031

Program to map biomedical text to the UMLS Metathesaurus and to discover Metathesaurus concepts referred to in text based on symbolic, natural-language processing and computational-linguistic techniques.

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