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H3Africa: current perspectives.

Nicola Mulder | Alash'le Abimiku | Sally N Adebamowo | Jantina de Vries | Alice Matimba | Paul Olowoyo | Michele Ramsay | Michelle Skelton | Dan J Stein
Pharmacogenomics and personalized medicine | 2018

Precision medicine is being enabled in high-income countries by the growing availability of health data, increasing knowledge of the genetic determinants of disease and variation in response to treatment (pharmacogenomics), and the decreasing costs of data generation, which promote routine application of genomic technologies in the health sector. However, there is uncertainty about the feasibility of applying precision medicine approaches in low- and middle-income countries, due to the lack of population-specific knowledge, skills, and resources. The Human Heredity and Health in Africa (H3Africa) initiative was established to drive new research into the genetic and environmental basis for human diseases of relevance to Africans as well as to build capacity for genomic research on the continent. Precision medicine requires this capacity, in addition to reference data on local populations, and skills to analyze and interpret genomic data from the bedside. The H3Africa consortium is collectively processing samples and data for over 70,000 participants across the continent, accompanied in most cases by rich clinical information on a variety of non-communicable and infectious diseases. These projects are increasingly providing novel insights into the genetic basis of diseases in indigenous populations, insights that have the potential to drive the development of new diagnostics and treatments. The consortium has also invested significant resources into establishing high-quality biorepositories in Africa, a bioinformatic network, and a strong training program that has developed skills in genomic data analysis and interpretation among bioinformaticians, wet-lab researchers, and health-care professionals. Here, we describe the current perspectives of the H3Africa consortium and how it can contribute to making precision medicine in Africa a reality.

Pubmed ID: 29692621

Research resources used in this publication

None found

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Associated grants

  • Agency: NHGRI NIH HHS, United States
    Id: U24 HG006941
  • Agency: NHGRI NIH HHS, United States
    Id: UH3 HG007008
  • Agency: NHGRI NIH HHS, United States
    Id: U01 HG008224
  • Agency: NHGRI NIH HHS, United States
    Id: U24 HG007008
  • Agency: NHGRI NIH HHS, United States
    Id: U54 HG006938

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This is a list of tools and resources that we have found mentioned in this publication.


Phenotypes and eXposures Toolkit (tool)

RRID:SCR_006532

Set of measures intended for use in large-scale genomic studies. Facilitate replication and validation across studies. Includes links to standards and resources in effort to facilitate data harmonization to legacy data. Measurement protocols that address wide range of research domains. Information about each protocol to ensure consistent data collection.Collections of protocols that add depth to Toolkit in specific areas.Tools to help investigators implement measurement protocols.

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