Searching the Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Poecilia vivipara, a small euryhaline guppy is reported at the Maceió River micro-basin in the Fernando de Noronha oceanic archipelago, northeast Brazil. However, the origin (human-mediated or natural dispersal) of this insular population is still controversial. The present study investigates how this population is phylogenetically related to the surrounding continental populations using the cytochrome oxidase I mitochondrial gene from eleven river basins in South America. Our phylogenetic reconstruction showed a clear geographical distribution arrangement of P. vivipara lineages. The Fernando de Noronha haplotype fell within the 'north' clade, closely related to a shared haplotype between the Paraíba do Norte and Potengi basins; the geographically closest continental drainages. Our phylogenetic reconstruction also showed highly divergent lineages, suggesting that P. vivipara may represent a species complex along its wide distribution. Regarding to the insular population, P. vivipara may have been intentionally introduced to the archipelago for the purpose of mosquito larvae control during the occupation of a U.S. military base following World War II. However, given the euryhaline capacity of P. vivipara, a potential scenario of natural (passive or active) dispersal cannot be ruled out.
Pubmed ID: 29674897
Publication data is provided by the National Library of Medicine ® and PubMed ®. Data is retrieved from PubMed ® on a weekly schedule. For terms and conditions see the National Library of Medicine Terms and Conditions.
NIH genetic sequence database that provides annotated collection of all publicly available DNA sequences for almost 280 000 formally described species (Jan 2014) .These sequences are obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects, including whole-genome shotgun (WGS) and environmental sampling projects. Most submissions are made using web-based BankIt or standalone Sequin programs, and GenBank staff assigns accession numbers upon data receipt. It is part of International Nucleotide Sequence Database Collaboration and daily data exchange with European Nucleotide Archive (ENA) and DNA Data Bank of Japan (DDBJ) ensures worldwide coverage. GenBank is accessible through NCBI Entrez retrieval system, which integrates data from major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of GenBank database are available by FTP.
View all literature mentionsSoftware package for sequence alignment, assembly and analysis. Integrated and extendable desktop software platform for organization and analysis of sequence data. Bioinformatics software platform packed with molecular biology and sequence analysis tools.
View all literature mentionsTHIS RESOURCE IS NO LONGER IN SERVICE, documented on January 19, 2022. Command line version of multiple sequence alignment program Clustal for DNA or proteins. Alignment is progressive and considers sequence redundancy. No longer being maintained. Please consider using Clustal Omega instead which accepts nucleic acid or protein sequences in multiple sequence formats NBRF/PIR, EMBL/UniProt, Pearson (FASTA), GDE, ALN/ClustalW, GCG/MSF, RSF.
View all literature mentions