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High-resolution structures of kinesin on microtubules provide a basis for nucleotide-gated force-generation.

Zhiguo Shang | Kaifeng Zhou | Chen Xu | Roseann Csencsits | Jared C Cochran | Charles V Sindelar
eLife | 2014

Microtubule-based transport by the kinesin motors, powered by ATP hydrolysis, is essential for a wide range of vital processes in eukaryotes. We obtained insight into this process by developing atomic models for no-nucleotide and ATP states of the monomeric kinesin motor domain on microtubules from cryo-EM reconstructions at 5-6 Å resolution. By comparing these models with existing X-ray structures of ADP-bound kinesin, we infer a mechanistic scheme in which microtubule attachment, mediated by a universally conserved 'linchpin' residue in kinesin (N255), triggers a clamshell opening of the nucleotide cleft and accompanying release of ADP. Binding of ATP re-closes the cleft in a manner that tightly couples to translocation of cargo, via kinesin's 'neck linker' element. These structural transitions are reminiscent of the analogous nucleotide-exchange steps in the myosin and F1-ATPase motors and inform how the two heads of a kinesin dimer 'gate' each other to promote coordinated stepping along microtubules.

Pubmed ID: 25415053

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Associated grants

  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM110530
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM 110530-01

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NAMD (tool)

RRID:SCR_014894

Parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD uses the popular molecular graphics program VMD for simulation setup and trajectory analysis, but is also file-compatible with AMBER, CHARMM, and X-PLOR.

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