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Identification of gene microarray expression profiles in patients with chronic graft-versus-host disease following allogeneic hematopoietic cell transplantation.

Holbrook E Kohrt | Lu Tian | Li Li | Ash A Alizadeh | Sue Hsieh | Robert J Tibshirani | Samuel Strober | Minnie Sarwal | Robert Lowsky
Clinical immunology (Orlando, Fla.) | 2013

Chronic graft-versus-host disease (GVHD) results in significant morbidity and mortality, limiting the benefit of allogeneic hematopoietic cell transplantation (HCT). Peripheral blood gene expression profiling of the donor immune repertoire following HCT may provide associated genes and pathways thereby improving the pathophysiologic understanding of chronic GVHD. We profiled 70 patients and identified candidate genes that provided mechanistic insight in the biologic pathways that underlie chronic GVHD. Our data revealed that the dominant gene signature in patients with chronic GVHD represented compensatory responses that control inflammation and included the interleukin-1 decoy receptor, IL-1 receptor type II, and genes that were profibrotic and associated with the IL-4, IL-6 and IL-10 signaling pathways. In addition, we identified three genes that were important regulators of extracellular matrix. Validation of this discovery phase study will determine if the identified genes have diagnostic, prognostic or therapeutic implications.

Pubmed ID: 23685278

Research resources used in this publication

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Associated grants

  • Agency: NCI NIH HHS, United States
    Id: 1P030CA124435-01
  • Agency: NIAID NIH HHS, United States
    Id: R01 AI085024
  • Agency: NHLBI NIH HHS, United States
    Id: P01 HL075462
  • Agency: NHLBI NIH HHS, United States
    Id: UG1 HL069291
  • Agency: NCI NIH HHS, United States
    Id: P01 CA049605
  • Agency: NCI NIH HHS, United States
    Id: P30 CA124435

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