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Conotoxin protein classification using free scores of words and support vector machines.

Nazar Zaki | Stefan Wolfsheimer | Gregory Nuel | Sawsan Khuri
BMC bioinformatics | 2011

Conotoxin has been proven to be effective in drug design and could be used to treat various disorders such as schizophrenia, neuromuscular disorders and chronic pain. With the rapidly growing interest in conotoxin, accurate conotoxin superfamily classification tools are desirable to systematize the increasing number of newly discovered sequences and structures. However, despite the significance and extensive experimental investigations on conotoxin, those tools have not been intensively explored.

Pubmed ID: 21619696

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LIBSVM (tool)

RRID:SCR_010243

An integrated software for support vector classification, (C-SVC, nu-SVC), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM) from the laboratory of Chih-Chung Chang and Chih-Jen Lin. It supports multi-class classification.

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