Searching the Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads.

Jeffrey Martin | Vincent M Bruno | Zhide Fang | Xiandong Meng | Matthew Blow | Tao Zhang | Gavin Sherlock | Michael Snyder | Zhong Wang
BMC genomics | 2010

Comprehensive annotation and quantification of transcriptomes are outstanding problems in functional genomics. While high throughput mRNA sequencing (RNA-Seq) has emerged as a powerful tool for addressing these problems, its success is dependent upon the availability and quality of reference genome sequences, thus limiting the organisms to which it can be applied.

Pubmed ID: 21106091

Research resources used in this publication

None found

Additional research tools detected in this publication

Antibodies used in this publication

None found

Associated grants

  • Agency: NIAID NIH HHS, United States
    Id: R01 AI077737
  • Agency: NIAID NIH HHS, United States
    Id: R01AI077737

Publication data is provided by the National Library of Medicine ® and PubMed ®. Data is retrieved from PubMed ® on a weekly schedule. For terms and conditions see the National Library of Medicine Terms and Conditions.

This is a list of tools and resources that we have found mentioned in this publication.


AMOS (tool)

RRID:SCR_013067

A collection of tools and class interfaces for the assembly of DNA reads.

View all literature mentions