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Intergenic, gene terminal, and intragenic CpG islands in the human genome.

Yulia A Medvedeva | Marina V Fridman | Nina J Oparina | Dmitry B Malko | Ekaterina O Ermakova | Ivan V Kulakovskiy | Andreas Heinzel | Vsevolod J Makeev
BMC genomics | 2010

Recently, it has been discovered that the human genome contains many transcription start sites for non-coding RNA. Regulatory regions related to transcription of this non-coding RNAs are poorly studied. Some of these regulatory regions may be associated with CpG islands located far from transcription start-sites of any protein coding gene. The human genome contains many such CpG islands; however, until now their properties were not systematically studied.

Pubmed ID: 20085634

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UCSC Genome Browser (tool)

RRID:SCR_005780

Portal to interactively visualize genomic data. Provides reference sequences and working draft assemblies for collection of genomes and access to ENCODE and Neanderthal projects. Includes collection of vertebrate and model organism assemblies and annotations, along with suite of tools for viewing, analyzing and downloading data.

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