Searching the RRID Resource Information Network
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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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dpy19l1lhi1073Tg Resource Report Resource Website |
RRID:ZIRC_ZL9820 | Danio rerio | Transgenic Insertion | dpy19l1lhi1073Tg | hi1073Tg | ZL9820 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | |||||
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med14hi2143Tg Resource Report Resource Website |
RRID:ZIRC_ZL9303 | Danio rerio | Transgenic Insertion | anatomical system, blood, blood vessel endothelial cell, brain, ceratobranchial 1 cartilage, ceratobranchial 2 cartilage, ceratobranchial 3 cartilage, ceratobranchial 4 cartilage, ceratobranchial 5 cartilage, ceratohyal cartilage, dorsal aorta, embryonic organ development, embryonic pectoral fin morphogenesis, ethmoid cartilage, fin, fin regeneration, forebrain ventricle, fourth ventricle, gut, head, heart, heart looping, heart tube, hindbrain, inner ear, inner ear development, liver, mandibular arch skeleton, Meckel''s cartilage, melanocyte, myotome, neural retina development, palatoquadrate cartilage, parachordal cartilage, pectoral fin, pericardium, posterior cardinal vein, response to external stimulus, retina, stem cell population maintenance, tectal ventricle, ventricular system, whole organism, yolk anatomical system, blood (all 44) | med14hi2143Tg | hi2143Tg | ZL9303 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | ||||
|
sf3a3hi1950Tg Resource Report Resource Website |
RRID:ZIRC_ZL9301 | Danio rerio | Transgenic Insertion | brain, central nervous system, hematopoietic stem cell differentiation, thymus primordium, ventral wall of dorsal aorta, whole organism brain, central nervous system (all 6) | sf3a3hi1950Tg | hi1950Tg | ZL9301 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | ||||
|
hdac1hi1618Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL540 | Danio rerio | Transgenic Insertion | atrium, blood, blood circulation, brain, bulbus arteriosus, cardiac ventricle, cartilage element, caudal fin, ceratobranchial cartilage, ceratohyal cartilage, ciliary marginal zone, CNS neuron (sensu Vertebrata), cranial cartilage, dorsal root ganglion, embryo development, endocrine cell, endodermal cell, exocrine pancreas, exocrine pancreas development, extension, eye, facial nerve motor nucleus, forebrain ventricle, gut, hatching, head, heart, heart contraction, heart looping, hematopoietic stem cell differentiation, hindbrain, hindbrain development, hyosymplectic cartilage, lens, liver, liver development, mandibular arch skeleton, Meckel''s cartilage, melanocyte, melanocyte differentiation, melanocyte migration, melanophore stripe, motor neuron, nervous system, neuromast development, neuron migration, notochord, optic fissure, optic tectum, otic vesicle, otolith, palatoquadrate cartilage, pancreas, pancreatic acinar gland, pectoral fin, pectoral fin cartilage, pericardium, pharyngeal arch 1, pharyngeal arch 2, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pigmentation, pigment cell, posterior lateral line neuromast, post-vent region, presumptive bulbus arteriosus, regulation of cell cycle, retina, retina layer formation, retinal neural layer, retinal pigmented epithelium, retina morphogenesis in camera-type eye, rhombomere boundary formation, secondary heart field specification, smooth muscle, snout, somite, statoacoustic (VIII) ganglion, swim bladder, thymus primordium, trunk, ventral wall of dorsal aorta, whole organism, yolk atrium, blood (all 84) | hdac1hi1618Tg/+ (AB) | hi1618Tg | ZL540 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | |||
|
mbtps1hi1487Tg Resource Report Resource Website |
RRID:ZIRC_ZL9385 | Danio rerio | Transgenic Insertion | brain development, cartilage element, chondrocyte morphogenesis, head, lipid localization, liver, lymph vessel, mandibular arch skeleton, Meckel''s cartilage, notochord, parachordal vessel, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton brain development, cartilage element (all 13) | mbtps1hi1487Tg | hi1487Tg | ZL9385 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | ||||
|
smohi229Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL497 | Danio rerio | Transgenic Insertion | adenohypophyseal placode, anterior commissure, anterior macula, atrium, axon guidance, brain, cardiac ventricle, caudal commissure, caudal fin, cell death, cell population proliferation, cellular senescence, cerebellum, cleithrum, commissural neuron axon guidance, common cardinal vein, cranial nerve II, diencephalon development, dopaminergic neuron, embryo development, endocardium development, endocrine cell, eye, fast muscle cell, floor plate, floor plate development, floor plate formation, forebrain, forebrain dorsal/ventral pattern formation, head, heart, heart primordium, hindbrain, inner ear, inner ear development, inner ear morphogenesis, intestine, Kupffer''s vesicle, lapillus, lateral floor plate, liver, liver development, macula, mandibular arch skeleton, medial floor plate, mesothelial cell, midbrain, midbrain hindbrain boundary, muscle cell differentiation, muscle pioneer, myoseptum, myotome, nervous system, oligodendrocyte development, oligodendrocyte differentiation, optic chiasm, optic stalk, otolith, pancreas, pancreas development, pancreas primordium, pars superior ear, pectoral fin, pericardium, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pillar of the anterior semicircular canal, positive regulation of DNA-templated transcription, posterior macula, postoptic commissure, post-vent region, primary motor neuron, proctodeum, retina development in camera-type eye, retinal ganglion cell, Rohon-Beard neuron, roof plate spinal cord region, sagitta, secondary motor neuron, segmental plate, sensory neuron, sensory system, skeletal muscle tissue development, slow muscle cell, smoothened signaling pathway, smooth muscle, somite, spinal cord, supraoptic commissure, surface structure, swim bladder, swim bladder development, swim bladder formation, tela chorioidea, trunk, vasculogenesis, ventral mesenchyme, ventral thalamus, ventricular system, whole organism, yolk adenohypophyseal placode, anterior commissure (all 101) | smohi229Tg/+ (AB) | hi229Tg | ZL497 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | |||
|
clint1ahi1520Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL9700 | Danio rerio | Transgenic Insertion | apoptotic chromosome condensation, caudal fin, cell death, cellular senescence, dorsal fin fold, epidermis, epithelial cell proliferation, eye, gut, head, heart, inflammatory response, integument, leukocyte migration involved in inflammatory response, liver, neutrophil chemotaxis, pericardium, peridermal cell, surface structure, trunk, ventral fin fold, whole organism, yolk apoptotic chromosome condensation, caudal fin (all 23) | clint1ahi1520Tg/+ (AB) | hi1520Tg | ZL9700 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | |||
|
cwc25hi1858aTg Resource Report Resource Website |
RRID:ZIRC_ZL9305 | Danio rerio | Transgenic Insertion | eye, gut, head, liver, retina, yolk eye, gut (all 6) | cwc25hi1858aTg | hi1858aTg | ZL9305 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | ||||
|
gpc4hi1934Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL539 | Danio rerio | Transgenic Insertion | adaxial cell, anterior neural plate, anterior-posterior polarized posterior lateral line neuromast, axis, axis elongation, cell, cell migration involved in gastrulation, cell morphogenesis, ceratobranchial 5 bone, ceratohyal cartilage, chondrocyte, convergent extension, convergent extension involved in axis elongation, convergent extension involved in gastrulation, cranial cartilage, dorsal convergence, dorsal lateral line neuromast, dorsal-ventral polarized posterior lateral line neuromast, endochondral bone, endochondral ossification, endoderm, endothelial cell, ethmoid cartilage, extension, eye, floor plate, forebrain, glycosaminoglycan metabolic process, head, head muscle, hypophyseal fenestra, interhyal cartilage, intermandibularis, Kupffer''s vesicle, mandibular arch skeleton, maxilla, Meckel''s cartilage, mesodermal cell migration, muscle cell migration, myotome, neural keel, neurocranial trabecula, notochord, notochord formation, notochord morphogenesis, notochord posterior region, ossification, palate, palatoquadrate cartilage, pancreas development, pancreatic bud, pharyngeal arch 3-7 skeleton, pharyngeal arch cartilage, post-anal tail morphogenesis, posterior lateral line neuromast primordium migration, posterior lateral line primordium, post-vent region, prechordal plate, pronephric duct, quadrate, quadrate-anguloarticular joint, retroarticular, rhombomere, slow muscle cell, somite, striated muscle cell development, symplectic, trunk, ventral fin fold, whole organism adaxial cell, anterior neural plate (all 70) | gpc4hi1934Tg/+ (AB) | hi1934Tg | ZL539 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | |||
|
kif23hi1730Tg Resource Report Resource Website |
RRID:ZIRC_ZL9413 | Danio rerio | Transgenic Insertion | brain, central nervous system, head, trunk, whole organism brain, central nervous system (all 5) | kif23hi1730Tg | hi1730Tg | ZL9413 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | ||||
|
capzbhi1858bTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1097 | Danio rerio | Transgenic Insertion | epidermal cell, ethmoid cartilage, eye, fin, head, head muscle, integument, Meckel''s cartilage, melanocyte, melanocyte migration, neural crest cell migration, palate, pectoral fin, roof of mouth development, skeletal muscle, skeletal muscle cell, surface structure, ventral mandibular arch epidermal cell, ethmoid cartilage (all 18) | capzbhi1858bTg/+ (AB) | hi1858bTg | ZL1097 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | |||
|
stxbp3hi2285Tg Resource Report Resource Website |
RRID:ZIRC_ZL9376 | Danio rerio | Transgenic Insertion | eye, gut, head, heart, inner ear, otolith, pericardium, trunk, whole organism eye, gut (all 9) | stxbp3hi2285Tg | hi2285Tg | ZL9376 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | ||||
|
wdr46hi1451Tg Resource Report Resource Website |
RRID:ZIRC_ZL9373 | Danio rerio | Transgenic Insertion | brain, central nervous system, eye, fourth ventricle, gut, head, heart, liver, midbrain hindbrain boundary, pericardium, trunk, yolk brain, central nervous system (all 12) | wdr46hi1451Tg | hi1451Tg | ZL9373 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:53 | 0 | ||||
|
rbm42hi2735aTg Resource Report Resource Website |
RRID:ZIRC_ZL9643 | Danio rerio | Transgenic Insertion | anatomical system, eye, gut, head, lens, liver, pericardium anatomical system, eye (all 7) | rbm42hi2735aTg | hi2735aTg | ZL9643 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | ||||
|
sec61a1hi2839bTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1082 | Danio rerio | Transgenic Insertion | cartilage element, cell division, cerebellum, chondrocyte, columnar/cuboidal epithelial cell, dorsal habenular nucleus, eye, gut, habenula, habenula development, head, heart, hyomandibula, innervation, liver, mandibular arch skeleton, neuroepithelial cell, neurogenesis, neuromast development, otolith, pericardium, pharyngeal arch 1, pharyngeal arch 2, pharyngeal arch 3-7 skeleton, posterior lateral line neuromast, post-vent region, sensory perception of touch, sensory system, third ventricle, trunk, whole organism cartilage element, cell division (all 31) | sec61a1hi2839bTg/+ (AB) | hi2839bTg | ZL1082 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | |||
|
cstf3hi2908Tg Resource Report Resource Website |
RRID:ZIRC_ZL9644 | Danio rerio | Transgenic Insertion | anatomical system, eye, gut, head, liver anatomical system, eye (all 5) | cstf3hi2908Tg | hi2908Tg | ZL9644 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | ||||
|
rpl3hi2437Tg Resource Report Resource Website |
RRID:ZIRC_ZL9762 | Danio rerio | Transgenic Insertion | central nervous system, exocrine pancreas, exocrine pancreas development, eye, gut, head, midbrain hindbrain boundary, pericardium, whole organism central nervous system, exocrine pancreas (all 9) | rpl3hi2437Tg | hi2437Tg | ZL9762 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | ||||
|
wee1hi2479Tg Resource Report Resource Website |
RRID:ZIRC_ZL9641 | Danio rerio | Transgenic Insertion | epiboly involved in gastrulation with mouth forming second, gastrulation with mouth forming second, multicellular organism development, whole organism epiboly involved in gastrulation with mouth forming second, gastrulation with mouth forming second (all 4) | wee1hi2479Tg | hi2479Tg | ZL9641 | Zebrafish Lines at ZIRC | ZIRC | frozen * | 2026-07-25 11:26:54 | 0 | ||||
|
utp11lhi2937Tg Resource Report Resource Website |
RRID:ZIRC_ZL9487 | Danio rerio | Transgenic Insertion | anatomical system, anterior commissure, brain, cranial nerve II, eye, forebrain, fourth ventricle, gut, head, hindbrain, liver, midbrain hindbrain boundary, nervous system, pericardium, postoptic commissure, spinal cord, trunk, whole organism, yolk anatomical system, anterior commissure (all 19) | utp11lhi2937Tg | hi2937Tg | ZL9487 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 | ||||
|
cltcahi2462Tg Resource Report Resource Website |
RRID:ZIRC_ZL2058 | Danio rerio | Transgenic Insertion | caudal vein, caudal vein plexus, forebrain, gut, head, heart, intersegmental vessel, liver, mandibular arch skeleton, midbrain, notochord, notochord cell vacuolation, pericardium, pharyngeal arch 3-7 skeleton, trunk, vasculature development, yolk caudal vein, caudal vein plexus (all 17) | cltcahi2462Tg | hi2462Tg | ZL2058 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-07-25 11:26:54 | 0 |
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