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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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University of Massachusetts; Massachusetts; USA Resource Report Resource Website 1+ mentions |
University of Massachusetts; Massachusetts; USA (RRID:SCR_000379) | UMass | university | A five-campus public university system in Massachusetts. The system includes four universities, a medical school, and a satellite campus. | public, university, system, boston, massachusetts, medicine |
is related to: Beta Cell Biology Consortium is parent organization of: University of Massachusetts Amherst; Massachusetts; USA is parent organization of: University of Massachusetts Lowell; Massachusetts; USA is parent organization of: University of Massachusetts Medical School; Massachusetts; USA is parent organization of: University of Massachusetts Chan Medical School Metabolomics Core Facility is parent organization of: University of Massachusetts Flow Cytometry Core Facility is parent organization of: University of Massachusetts Chan Medical School BioImage Data Management and Sharing Core Facility |
GRID grid.266684.8, ISNI 0000 0001 2184 9220, nlx_18192, Wikidata Q1061122 | https://ror.org/0260j1g46 | SCR_000379 | University of Massachusetts System, UMass, University of Massachusetts | 2026-07-25 12:04:44 | 2 | |||||||
|
Tianjin University; Tianjin; China Resource Report Resource Website |
Tianjin University; Tianjin; China (RRID:SCR_000372) | TJU | university | A national university in China with degree programs that include engineering, economics, humanities, law and art at the undergraduate, graduate and doctoral level. | china, national university, engineering, economics, law, humanities, doctoral, undergraduate, graduate |
is parent organization of: DEG - Database of Essential Genes is parent organization of: Greglist is parent organization of: QTLbase |
grid.33763.32, Crossref funder ID:501100004517, Wikidata:Q2031560, nlx_28979, ISNI:0000 0004 1761 2484 | https://ror.org/012tb2g32 | http://www.tju.edu.cn/english/ | SCR_000372 | TJU | 2026-07-25 12:04:43 | 0 | ||||||
|
Tuskegee University; Alabama; USA Resource Report Resource Website |
Tuskegee University; Alabama; USA (RRID:SCR_000373) | university | A private, historically black university that offers degree programs at the undergraduate, graduate, doctoral and professional levels. The university has programs that include veterinarian studies, allied health, nursing, education | tuskegee, alabama, private, historically black, doctoral, professional, veterinarian |
is parent organization of: Tuskegee Center for Biomedical Research - Digital Imaging is parent organization of: Tuskegee Center for Biomedical Research Shared Instrumentation Core is parent organization of: Tuskegee University Computational Biology and Bioinformatics - Biomedical Information Management Services |
nlx_156108, ISNI:0000 0001 0707 9354, Wikidata:Q1682329, grid.265253.5 | https://ror.org/0137n4m74 | SCR_000373 | Tuskegee University | 2026-07-25 12:04:44 | 0 | ||||||||
|
London School of Economics and Political Science; London; United Kingdom Resource Report Resource Website |
London School of Economics and Political Science; London; United Kingdom (RRID:SCR_000370) | LSE | university | A public research university in London with an emphasis in social science degree programs such as law, mathematics, public affairs and international history. The university offers degrees at the undergraduate, graduate and doctoral level. | social science, humanities, economics, undergraduate, graduate, postdoctoral, research | nlx_158056 | SCR_000370 | London School of Economics and Political Science, London School of Economics | 2026-07-25 12:04:44 | 0 | |||||||||
|
Tel Aviv University; Ramat Aviv; Israel Resource Report Resource Website |
Tel Aviv University; Ramat Aviv; Israel (RRID:SCR_000371) | university | A public university in Israel with degree programs in areas such as arts, engineering, humanities, the law and medicine at the undergraduate and graduate level. The university has affiliated but independent schools that focus on specific areas such as music, environmental studies, dentistry, social work, education and neuroscience. | israel, public, engineering, law, humanities, dentistry, social work, education, neuroscience, environment, music, medicine |
is related to: AgedBrainSYSBIO is parent organization of: MODENT - A Tool For Reconstructing Gene Regulatory Networks is parent organization of: ConSurf Database is parent organization of: HYDEN is parent organization of: TranspoGene is parent organization of: FlexProt: flexible protein alignment is parent organization of: Network-based Prediction of Human Tissue-specific Metabolism is parent organization of: ConSurf Database is parent organization of: RsiteDB- RNA binding sites database is parent organization of: Cross-Sectional and Longitudinal Aging Study is parent organization of: SPIKE |
nlx_45243 | SCR_000371 | TAU | 2026-07-25 12:04:43 | 0 | |||||||||
|
Lonza Resource Report Resource Website 500+ mentions |
Lonza (RRID:SCR_000377) | Lonza | commercial organization | A supplier of various biochemical products for research in pharmacy and biotechnology as well as the specialty ingredients market. Examples of products include active pharmaceutical ingredients, stem cell therapies, drinking water sanitizers and agriculture services and products. | supplier, biomaterial, biochemical, pharmacy, stem cell, agriculture |
is listed by: ScienceExchange is parent organization of: Lonza Viral Based Therapeutics |
grid.473847.b, ISNI: 0000 0004 4691 9813, SciEx_4981 | https://ror.org/00yqk5t74 | http://www.scienceexchange.com/facilities/lonza | SCR_000377 | 2026-07-25 12:04:43 | 963 | |||||||
|
University of Southern Queensland; Queensland; Australia Resource Report Resource Website |
University of Southern Queensland; Queensland; Australia (RRID:SCR_000374) | university | A public university in Australia that offers degree programs in business, law and education as well as health, engineering and the sciences at the undergraduate level. The university also does research at three research institutes and seven research centers which focus on a wide range of business, agricultural, scientific, environmental, and technological issues. | public, business, law, education, health, engineering, sciences, research, agriculture, technology, environment |
is parent organization of: Australian Digital Futures Institute is parent organization of: Fascinator is parent organization of: Integrated Content Environment |
ISNI:0000 0004 0473 0844, Wikidata:Q978124, nlx_46605, grid.1048.d, Crossref funder ID:501100001795 | https://ror.org/04sjbnx57 | SCR_000374 | USQ | 2026-07-25 12:04:43 | 0 | ||||||||
|
rTANDEM Resource Report Resource Website |
rTANDEM (RRID:SCR_000409) | software resource | An R/Bioconductor package that interfaces the X!Tandem protein identification algorithm. | standalone software, mac os x, unix/linux, windows, r, mass spectrometry, proteomics |
is used by: shinyTANDEM is listed by: OMICtools has parent organization: Bioconductor |
PMID:24700319 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_03516 | SCR_000409 | rTANDEM - Interfaces the tandem protein identification algorithm in R | 2026-07-25 12:04:44 | 0 | |||||||
|
Allegheny College; Pennsylvania; USA Resource Report Resource Website |
Allegheny College; Pennsylvania; USA (RRID:SCR_000369) | university | A private liberal arts college that offers degrees in social sciences, humanities and natural sciences at the undergraduate level. | private, liberal arts, social science, humanities, natural sciences, undergraduate | is parent organization of: Allegheny College Neuroscience | nlx_40570 | SCR_000369 | 2026-07-25 12:04:43 | 0 | ||||||||||
|
NucleoFinder Resource Report Resource Website 1+ mentions |
NucleoFinder (RRID:SCR_000368) | NucleoFinder | software resource | A software for a statistical approach for the detection of nucleosome positions in a cell population. The software identifies important features of nucleosome organization such as the spacing downstream of active promoters and the enrichment and depletion of GC/AT dinucleotides of in vitro nucleosomes. | nucleusome, position, promoter, analysis, downstream, nucleotide, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian |
PMID:23297036 | THIS RESOURCE IS NO LONGER IN SERVICE | biotools:nucleofinder, OMICS_00510 | https://omictools.com/nucleofinder-tool, https://bio.tools/nucleofinder | SCR_000368 | 2026-07-25 12:04:43 | 1 | ||||||
|
flowPeaks Resource Report Resource Website |
flowPeaks (RRID:SCR_000407) | software resource | Software for fast and automatic clustering to classify the cells into subpopulations based on finding the peaks from the overall density function generated by K-means. | software package, mac os x, unix/linux, windows, r, clustering, flow cytometry, gating, bio.tools |
is listed by: OMICtools is listed by: GitHub is listed by: bio.tools is listed by: Debian has parent organization: Bioconductor |
PMID:22595209 | Free, Available for download, Freely available | biotools:flowpeaks, OMICS_05604 | http://www.bioconductor.org/packages/devel/bioc/html/flowPeaks.html, https://bio.tools/flowpeaks | SCR_000407 | 2026-07-25 12:04:45 | 0 | |||||||
|
MiRdup Resource Report Resource Website 1+ mentions |
MiRdup (RRID:SCR_000316) | software resource | A software used for the validation of pre-miRNAs predictions as well as predict the final structure of mature miRNA. | pre-miRNA, miRNA, mRNA, splicing, predictions |
is listed by: OMICtools has parent organization: McGill University; Montreal; Canada |
PMID:23748953 | Free, Available for download, Freely available | OMICS_00404 | https://www.cs.mcgill.ca/~blanchem/mirdup/ | http://This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or any later version. | SCR_000316 | 2026-07-25 12:04:42 | 1 | ||||||
|
RStudio Resource Report Resource Website 1000+ mentions |
RStudio (RRID:SCR_000432) | RStudio | software resource | Open source and enterprise ready professional software for R statistical computing environment. Integrated development environment for R. Includes console, syntax highlighting editor that supports direct code execution, as well as tools for plotting, history, debugging and workspace management. Available in open source and commercial editions and runs on desktop Windows, Mac, and Linux or in browser connected to RStudio Server or RStudio Server Pro (Debian/Ubuntu, RedHat/CentOS, and SUSE Linux). | R, statistical, computing, environment |
is used by: PlotsOfData is listed by: Debian is listed by: SoftCite is related to: rSPRITE is related to: shinyCircoss is parent organization of: Shiny is required by: circlncRNAnet |
Restricted | SciRes_000113 | https://sources.debian.org/src/rstudio/, https://posit.co/download/rstudio-desktop/ | http://www.rstudio.com/ | SCR_000432 | 2026-07-25 12:04:45 | 1034 | ||||||
|
QUALIFIER Resource Report Resource Website |
QUALIFIER (RRID:SCR_000389) | software resource | Software that provides quality control and quality assessment tools for gated flow cytometry data. | software package, mac os x, unix/linux, windows, r, cell based assay, flow cytometry, infrastructure |
is listed by: OMICtools has parent organization: Bioconductor |
PMID:23020243 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_05618 | SCR_000389 | QUALIFIER - Quality Control of Gated Flow Cytometry Experiments | 2026-07-25 12:04:43 | 0 | |||||||
|
Scribe Resource Report Resource Website |
Scribe (RRID:SCR_000423) | Scribe | software resource | Scribe encodes papers to populate the BrainMap Database | magnetic resonance, pet, spect |
is used by: brainmap.org is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) |
Free, Freely available | nlx_155958 | SCR_000423 | 2026-07-25 12:04:45 | 0 | ||||||||
|
GraphPad Resource Report Resource Website 1000+ mentions |
GraphPad (RRID:SCR_000306) | commercial organization | A commercial graphing software company that offers scientific software for statistical analyses, curve fitting and data analysis. It offers four programs: Prism, InStat, StatMate and QuickCalcs. | company, data, graph, scientific, statistical, analysis, curve, fitting |
is listed by: SoftCite is parent organization of: GraphPad Prism |
Restricted | nlx_156835 | SCR_000306 | 2026-07-25 12:04:41 | 1284 | |||||||||
|
Altmetric Bookmarklet Resource Report Resource Website |
Altmetric Bookmarklet (RRID:SCR_000427) | Altmetric Bookmarklet | software resource | Free bookmarklet for Chrome, Firefox and Safari that allows you to instantly get article level metrics for any recent paper. Simply drag the button below to your bookmarks bar, navigate to a journal article page, and hit Altmetric it! | altmetrics, chrome, firefox, safari | is listed by: FORCE11 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156030 | http://www.force11.org/node/4720 | SCR_000427 | The Altmetric Bookmarklet | 2026-07-25 12:04:44 | 0 | ||||||
|
Washington University in St. Louis; Missouri; USA Resource Report Resource Website 1+ mentions |
Washington University in St. Louis; Missouri; USA (RRID:SCR_000343) | WUSTL, WashU | university | Private research university in Greater St. Louis with its main campus mostly in unincorporated St. Louis County, Missouri and Clayton, Missouri. | missouri, undergraduate, postgraduate, graduate, university |
uses: Scizzle uses: Research Accelerator is affiliated with: Diabetes Research Centers is related to: Alzheimers Disease Genetics Consortium is related to: Clinical and Translational Science Awards Consortium is related to: Urinary Stone Disease Research Network is related to: Connectome Workbench is parent organization of: Washington University School of Medicine Knight Alzheimers Disease Research Center is parent organization of: DicomBrowser is parent organization of: Washington University School of Medicine Genome Technology Access Center Core Facility is parent organization of: DiMO is parent organization of: Washington University Neuromuscular Disease Center is parent organization of: Surface-Based Atlases is parent organization of: Neurologic AIDS Research Consortium is parent organization of: SomaticSniper is parent organization of: SPLINTER is parent organization of: DGIdb is parent organization of: Bayesian Analysis of Common NMR Problems is parent organization of: Genome Center BLAST Server is parent organization of: Washington University in St. Louis Neuroscience is parent organization of: Nematode.net is parent organization of: Human Gut Microbiome Initiative is parent organization of: Adaptive Poisson-Boltzmann Solver is parent organization of: Human Connectome Coordination Facility is parent organization of: MuSiC is parent organization of: Washington University School of Medicine in St. Louis; Missouri; USA is parent organization of: WUSTL Hybridoma Center is parent organization of: WUSTL Mouse Cardiovascular Phenotyping Core is parent organization of: WUSTL NNIN - Nano Research Facility is parent organization of: WUSTL Biology Department Imaging Facility is parent organization of: WUSTL Histology Core is parent organization of: Washington University in St. Louis School of Medicine Division of Biology and Biomedical Sciences is parent organization of: Collaborative Study on the Genetics of Alcoholism is parent organization of: Stroke Trials Registry is parent organization of: Neurology Image Library from The Internet Stroke Center is parent organization of: WormBase is parent organization of: ConnectomeDB is parent organization of: NIMH Repository and Genomics Resources is parent organization of: GLMdenoise: a fast, automated technique for denoising task-based fMRI data is parent organization of: Washington University Center for Diabetes Translation Research Administrative Core in Diabetes Research Core is parent organization of: Washington University Center for Diabetes Translation Research Dissemination and Implementation in Diabetes Research Core Facility is parent organization of: Washington University Center for Diabetes Translation Research Solutions to Diabetes in Black Americans Core is parent organization of: Washington University Center for Diabetes Translation Research Health Informatics in Diabetes Research Core is parent organization of: Washington University Center for Diabetes Translation Research is parent organization of: Washington University Center for Diabetes Translation Research Policy and Systems Science Analysis in Diabetes Research Core is parent organization of: Washington University Center for Diabetes Translation Research Health Communication and Health Literacy Core Facility is parent organization of: Washington University Center for Diabetes Translation Research Research Partnerships with American Indian/Alaskan Native Communities Core is parent organization of: Washington University School of Medicine Genome Technology Access Center Core Facility is parent organization of: Rodent Arena Tracker project is parent organization of: SnackClock is parent organization of: Feeding Experimentation Device project is parent organization of: Washington University in St. Louis Human Cells, Tissues, and Organoids Core Facility is parent organization of: Washington University School of Medicine Mass Spectrometry Technology Access Center Core Facility is parent organization of: Washington University in St. Louis Washington University Center for Cellular Imaging Core Facility is parent organization of: Washington University Digestive Diseases Research Core Center Biobank Core is parent organization of: Washington University School of Medicine Diabetes Research Center Translational Diagnostics Core is parent organization of: Washington University School of Medicine Diabetes Research Center Cell and Tissue Imaging Core is parent organization of: Washington University School of Medicine Diabetes Research Center Mass Spectrometry Core has organization facet: VarScan |
SCR_017964, Wikidata:Q777403, Crossref funder ID:100007268, ISNI:0000 0001 2355 7002, grid.4367.6, nlx_47548 | https://ror.org/01yc7t268 | SCR_000343 | Washington University | 2026-07-25 12:04:43 | 1 | |||||||
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University of Zaragoza; Zaragoza; Spain Resource Report Resource Website |
University of Zaragoza; Zaragoza; Spain (RRID:SCR_000341) | UZ | university | An undergraduate and postgraduate university which is located in Zaragoza, Spain. | zaragoza, university, undergraduate, postgraduate | is parent organization of: BCIZaragoza - YouTube | nlx_144537 | SCR_000341 | University of Zaragoza, Universidad de Zaragoza | 2026-07-25 12:04:42 | 0 | ||||||||
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University of Zurich; Zurich; Switzerland Resource Report Resource Website 1+ mentions |
University of Zurich; Zurich; Switzerland (RRID:SCR_000342) | UZH | university | University located in Zürich, Switzerland was founded in 1833. Has faculties in Philosophy, Human Medicine, Economic Sciences, Law, Mathematics and Natural Sciences, Theology and Veterinary Medicine. Offers the widest range of subjects and courses of any Swiss higher education institution. As of October 2018, 23 Nobel laureates and 1 Turing Award winner have been affiliated with University of Zurich as alumni, faculty or researchers. | immunology, genetics, neuroscience, structural biology, medicine, master, bachelor, phd |
is parent organization of: Connectome Wiki is parent organization of: Swiss Institute of Allergy and Asthma Research is parent organization of: MLTreeMap is parent organization of: University of Zurich SCRM - Cell-and Tissue Biobank is parent organization of: HPC-CLUST is parent organization of: Segmented ssTEM stack of neural tissue is parent organization of: Low Resolution Electromagnetic Tomography is parent organization of: Institute of Neuroinformatics is parent organization of: Institute for Neuroinformatics: Cortex 3D is parent organization of: TrakEM2 is parent organization of: B-Fabric is parent organization of: MINAS - Metal Ions in Nucleic AcidS is parent organization of: sLORETA is parent organization of: exact Low Resolution Electromagnetic Tomography is parent organization of: Grid Enabled Molecular Science Through Online Networked Environments is parent organization of: CATALYSTLite is parent organization of: imctools is parent organization of: Hierarchical Unsupervised Generative Embedding toolbox is parent organization of: PAXdb is parent organization of: University of Zurich Center for Microscopy and Image Analysis Core Facility is parent organization of: Progenetix |
nlx_15354 | SCR_000342 | University of Zurich, Universitat Zurich | 2026-07-25 12:04:43 | 1 |
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