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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Open Face Homecage Running Wheel Resource Report Resource Website |
Open Face Homecage Running Wheel (RRID:SCR_023642) | software resource, instrument resource | Open source, printable, open faced running wheels for mice residing in home cage that is automated to collect locomotor information such as distance traveled, wheel direction, and velocity. Running wheel system available on GitHub contains code and information to create and run running wheels. System consists of 3D printed wheel, Raspberry Pi 0 W, and supporting components. | Running wheels for mice, OpenBehavior, instrument, running wheels, 3D printed wheel, | is listed by: OpenBehavior | PMID:36241420 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/running-wheel/ | SCR_023642 | 2026-07-25 12:13:13 | 0 | ||||||||
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B-CALM Resource Report Resource Website 1+ mentions |
B-CALM (RRID:SCR_023884) | software resource, instrument resource | Open source system for behavioral control based on Arduino Mega microcontroller and MATLAB based graphical interface and analysis code. Behavior controller optimized and customized for associative learning and memory tasks. Provided software should be able to control many different types of hardware for different task configurations. | OpenBehavior, instrument, behavioral controller, associative learning and memory, | is listed by: OpenBehavior | NIMH R00MH118422; NIMH R01MH129582; NIAAA R01AA029661; Scott Alan Myers Endowed Professorship |
PMID:37464151 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/b-calm/ | SCR_023884 | 2026-07-25 12:13:13 | 1 | |||||||
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RatInABox Resource Report Resource Website 1+ mentions |
RatInABox (RRID:SCR_023682) | software resource, software toolkit | Software Python toolkit for modelling locomotion and neuronal activity in continuous environments. Used to model realistic rodent locomotion and generate synthetic electrophysiological data from spatially modulated cell types. | OpenBehavior, modelling locomotion and neuronal activity, continuous environments, model realistic rodent locomotion, generate synthetic electrophysiological data, spatially modulated cell types, | is listed by: OpenBehavior | DOI:10.1101/2022.08.10.503541 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/ratinabox/ | SCR_023682 | 2026-07-25 12:13:14 | 1 | ||||||||
|
LiftPose3D Resource Report Resource Website |
LiftPose3D (RRID:SCR_023049) | software application, software resource | Software tool for transforming 2D poses to 3D coordinates on labaratory animals. Used for kinematic studies of laboratory animals. Tracking movements in three dimensions from behaving flies, mice, rats, and non-human primates. | OpenBehavior, transforming 2D poses to 3D coordinates, kinematic studies, laboratory animals, tracking movements | is listed by: OpenBehavior | SNSF Project ; SNSF Eccellenza ; European Union Horizon 2020 ; Mexican National Council for Science and Technology |
PMID:34354294 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/?s=LiftPose3D | SCR_023049 | 2026-07-26 09:08:04 | 0 | |||||||
|
M3 Platform Resource Report Resource Website |
M3 Platform (RRID:SCR_023425) | software application, software resource | Software neuroscience laboratory environment for simultaneous neuronal imaging and behavioral monitoring. McGill-Mouse-Miniscope Touchscreen Behavior Platform. Standardized approach for high throughput imaging of neuronal dynamics during behavior. | OpenBehavior, touchscreen behavioral platform, calcium imaging, animal behavioral testing.standardized measurements, neuronal activity, behavioral tasks, disease modeling, mice | is listed by: OpenBehavior | Canada First Research Excellence Fund | PMID:32691490 | Free, Available for download, Freely available, | https://edspace.american.edu/openbehavior/project/m3-platform-the-mcgill-mouse-miniscope-touchscreen-behavior-platform/ | SCR_023425 | McGill-Mouse-Miniscope (M3) Platform, McGill-Mouse-Miniscope platform | 2026-07-26 09:08:07 | 0 | ||||||
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LabNet Resource Report Resource Website |
LabNet (RRID:SCR_023712) | software application, software resource | Open source software for parallel control over multiple behavioral systems.C++ optimized control layer software to give access to Raspberry Pi connected hardware. Suitable for time critical operations, and to be simple to expand. Used for general automation in experimental laboratories with its control PC located at some distance. | OpenBehavior, parallel control over multiple behavioral systems, C++ optimized control layer, access to Raspberry Pi connected hardware, | is listed by: OpenBehavior | German Research Foundation | PMID:36583654 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/labnet/ | SCR_023712 | 2026-07-26 09:08:12 | 0 | |||||||
|
LED Zappelin’ Resource Report Resource Website |
LED Zappelin’ (RRID:SCR_022560) | topical portal, portal, data or information resource | Open source LED controller for arbitrary spectrum visual stimulation and optogenetics during 2 photon imaging. Device that rapidly time interleaves stimulation and detection epochs during two photon imaging. | Instrument, OpenBehavior, LED controller, arbitrary spectrum visual stimulation, optogenetics, two photon imaging, stimulation and detection, behavioral neuroscience |
is listed by: OpenBehavior has parent organization: University of Sussex; Brighton; United Kingdom |
PMID:35498254 | Free, Freely available | https://edspace.american.edu/openbehavior/project/led-zappelin/ | SCR_022560 | 2026-07-26 09:07:50 | 0 | ||||||||
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Automated Rodent Tracker Resource Report Resource Website |
Automated Rodent Tracker (RRID:SCR_021510) | ART | software application, software resource, data processing software | Software tool to automatically track rodent position and movement.Used to track head movements, body movements and also aspects of body size. It is able to identify certain behaviours from video footage too, such as rotations, moving forwards, interacting with objects and staying still. | Track rodent position, track movement, track head movements, track body movements, OpenBehavior |
is listed by: OpenBehavior is related to: Automated Rodent Tracker project |
DOI:10.1016/j.jneumeth.2017.04.006 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/automated-rodent-tracker-art/ | SCR_021510 | 2026-07-26 09:07:46 | 0 | |||||||
|
Bell Jar Resource Report Resource Website |
Bell Jar (RRID:SCR_026912) | software application, software resource, source code | Software mouse brain histology tool for neuroscientists. Semiautomated registration and cell counting tool for mouse neurohistology analysis. | neurohistology analysis, mouse brain, mouse brain histology, | is listed by: OpenBehavior | PMID:39909716 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/bell-jar/, https://github.com/asoronow/belljar/blob/main/docs/belljar_guide.pdf, | SCR_026912 | 2026-07-26 09:09:05 | 0 | ||||||||
|
SEB3R Resource Report Resource Website |
SEB3R (RRID:SCR_025161) | SEB3R | software application, software resource, source code | Software tool to automate and standardize ethologically driven observation of freely moving mice. Identifies different postures of mice and associates them with emotions, offering detailed analysis of their movements frame by frame. Used for tracking mouse body language and studying emotional behaviors. | OpenBehavior, rodents behavioral tracking in 3D, automate and standardize ethologically driven observation, freely moving mice, tracking mouse body language, emotional behavior, |
is listed by: OpenBehavior has parent organization: University of Trento; Trento; Italy |
PMID:37648448 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/seb3r/ | SCR_025161 | Stimulus Evoked Behavioral tracking in 3D for Rodents | 2026-07-26 09:08:32 | 0 | ||||||
|
Live Mouse Tracker Toolkit Analysis Resource Report Resource Website |
Live Mouse Tracker Toolkit Analysis (RRID:SCR_024592) | LMT Toolkit | web application, software resource | Open source web application created to analyze Live Mouse Tracker data easily and intuitively. Used to check reliability and to make some analysis of data from Live Mouse Tracker experiments. LMT stores data in SQLite files that requires some computer skills, but LMT-toolkit makes it easy to compute and extract behavioral profiles for each animal tested following step-by-step process. | OpenBehavior, check LMT data reliability, analyze Live Mouse Tracker data, compute and extract behavioral profiles, |
is listed by: OpenBehavior is related to: Live Mouse Tracker analysis is related to: Live Mouse Tracker project |
Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/live-mouse-tracker/ | SCR_024592 | , LMT Toolkit, lmt toolkit analysis, LMT toolkit analysis, LMT-toolkit, LMT-Toolkit Analysis, Live Mouse Tracker Toolkit | 2026-07-27 09:37:10 | 0 | |||||||
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Laubach Lab GitHub Repository project Resource Report Resource Website |
Laubach Lab GitHub Repository project (RRID:SCR_021464) | project portal, instrument resource, portal, data or information resource | Portal related to control and decision making, focusing on role of prefrontal cortex. American University scientists through their GitHub repository provide 3D print files for many of behavioral devices used in their lab, including Nosepoke and Lickometer designed from rats. | Prefrontal cortex, behavioral devices, 3D print files collection, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: American University; Washington D.C.; USA |
Free, Freely available | SCR_021464 | Laubach Lab GitHub Repository | 2026-07-27 09:36:23 | 0 | |||||||||
|
Voluntary Access Static Incapacitance Chamber project Resource Report Resource Website 1+ mentions |
Voluntary Access Static Incapacitance Chamber project (RRID:SCR_021458) | VASIC | project portal, instrument resource, portal, data or information resource | Project related to assessment of pain in animal models.Provided system includes weight bearing device for high throughput and unbiased behavioral pain assessment in rodents.Includes custom printed circuit board, infrared sensor, Arduino microcontroller, 3D printed parts, and open source software for analysis. | Weight bearing, behavioral pain assessment, rodent pain assessment, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1016/j.ohx.2018.e00031 | Free, Freely available | SCR_021458 | Voluntary Access Static Incapacitance Chamber | 2026-07-27 09:36:23 | 1 | |||||||
|
ToxTrac Resource Report Resource Website 1+ mentions |
ToxTrac (RRID:SCR_021502) | software application, image processing software, software resource, data processing software | Software tool for tracking organisms. | Tracking organisms, tracking fish, tracking insects, tracking rodents, behavior measurement, freely moving, OpenBehavior |
is listed by: OpenBehavior is related to: ToxTrac project |
DOI:10.1111/2041-210x.12874 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/toxtrac/ | SCR_021502 | 2026-07-27 09:36:22 | 9 | ||||||||
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ArduiPod Box project Resource Report Resource Website |
ArduiPod Box project (RRID:SCR_021466) | project portal, instrument resource, portal, data or information resource | Project related to presenting visual and auditory stimuli, recording behavior in form of nose pokes or screen touches, and delivering liquid rewards. ProvidesOperant chamber built with iPod Touch and Arduino microcontroller as main components. | Operant conditioning chamber, visual stimuli presentation, auditory stimuli presentation, record behavior, nose pokes, screen touches, deliver liquid reward, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:0.3758/s13428-013-0367-5 | Free, Freely available | SCR_021466 | ArduiPod Box | 2026-07-27 09:36:21 | 0 | ||||||||
|
3DTracker Resource Report Resource Website |
3DTracker (RRID:SCR_021506) | reconstruction software, image analysis software, software resource, software application, data processing software | Open source software tool for 3D-video based markerless computerized behavioral analysis for laboratory animals.Used to reconstruct full 3D images of animals and fit skeletal models to 3D image to estimate 3D pose of animals.Open-source 3D video based behavioral analysis system for neuroscience. | 3D video, computerized behavioral analysis, laboratory animals, reconstruct 3D image, animal image, 3D image, estimate animal 3D pose, behavior measurement, freely moving, head fixed, OpenBehavior |
is listed by: OpenBehavior is related to: 3DTracker project |
Free, Freely Available | https://edspace.american.edu/openbehavior/project/3dtracker/, http://www.3dtracker.org/ | SCR_021506 | 2026-07-27 09:36:22 | 0 | |||||||||
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EthoScopes Resource Report Resource Website 1+ mentions |
EthoScopes (RRID:SCR_021507) | software application, software resource, data processing software, data analysis software | Software R package for data analysis.Enables high throughput analysis of behavior in Drosophila and other animals. | Data analysis, ethoscope platform, behavior analysis, Drosophila analysis, animals behavior analysis, OpenBehavior |
is listed by: OpenBehavior is related to: EthoScopes project |
DOI:10.1371/journal.pbio.2003026 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/ethoscopes/ | SCR_021507 | Ethoscope | 2026-07-27 09:36:24 | 1 | |||||||
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Joystick project Resource Report Resource Website |
Joystick project (RRID:SCR_021442) | project portal, instrument resource, portal, data or information resource | Project related to studying motor behavior and decision making in mice. Open source behavior training platform for studying motor control, decision making, and reaching reaction time. Enables behavioral work to study unexplored features of action selection, motivation, and value based decisions. | Motor control, decision making, reaction time, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1523/eneuro.0523-19.2020 | Free, Freely available | SCR_021442 | Joystick | 2026-07-27 09:36:21 | 0 | ||||||||
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Catalepsy Bar project Resource Report Resource Website |
Catalepsy Bar project (RRID:SCR_021439) | project portal, instrument resource, portal, data or information resource | Project related to measuring of muscular rigidity that can result from several factors including Parkinsons disease, or pharmacological exposure to antipsychotics or cannabis. Provides automated apparatus for measuring catalepsy that increases measurement accuracy and reduces observer bias.Catalepsy bar test automatically measures and records time it takes for rat to remove its forelimbs from bar. 3D printed test apparatus used to make catalepsy measurements in rats more standardized and accurate. | Automated apparatus, measuring catalepsy, measurement accuracy, observer bias reduction, catalepsy bar test, automatically records time, remove forelimbs from bar, rat, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: University of Guelph; Ontario; Canada |
DOI:10.1523/eneuro.0488-19.2020 | Free, Available for download, Freely available | https://www.khokharlab.com/open-source-file-downloads | SCR_021439 | Catalepsy Bar | 2026-07-27 09:36:21 | 0 | |||||||
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Skinner Box project Resource Report Resource Website |
Skinner Box project (RRID:SCR_021437) | project portal, instrument resource, portal, data or information resource | Project related to training animal behavior. Provides system which includes full behavioral apparatus and software platform. System includes software tool for data logging and analysis. | Open Skinner Box, data logging, data analysis, behavioral system, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: Skinner Box |
Free, Freely available | SCR_021437 | Skinner Box | 2026-07-27 09:36:22 | 0 |
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